Job Description P46923 Confidence 100.00% Date Thu Jan 5 12:04:40 GMT 2012 Rank 3 Aligned Residues 753 % Identity 49% Template c1eu1A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dimethyl sulfoxide reductase; PDBTitle: the crystal structure of rhodobacter sphaeroides dimethylsulfoxide2 reductase reveals two distinct molybdenum coordination environments. Resolution 1.30 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		G	G	K	I	L	T	A	G	R	W	G	A	M	N	V	E	V	K	D	G	K	I	V	S	S	T	G	A	L	A	K	T	I	P	N	S	L	Q	S	T	A	A	D	Q	V	H	T	T	A	R	I	Q	H	P	M	V	R	.	K	S	Y	L	D	N	P	L	Q	P	A	K	G	R	G	E	D	T	Y	V	Q	V
Query Conservation																																																											.
Alig confidence													.																																														.
Template Conservation													.
Template Sequence		G	E	V	M	S	G	C	H	W	G	V	.	F	K	A	R	V	E	N	G	R	A	V	A	F	E	P	W	D	K	D	P	A	P	S	H	Q	L	P	G	V	L	D	S	I	Y	S	P	T	R	I	K	Y	P	M	V	R	R	E	F	L	E	K	G	V	N	A	D	R	S	T	R	G	N	G	D	F	V	R	V
Template Known Secondary structure									T	T			.							T	T									T	T		S	S			T	T							T	T	T	S	T	T	B			S											G	G	G	S		G	G	G	T	T	S	S
Template Predicted Secondary structure													.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	W	E	Q	A	L	K	L	I	H	E	Q	H	D	R	I	R	K	A	N	G	P	S	A	I	F	A	G	S	Y	G	W	R	S	S	G	V	L	H	K	A	Q	T	L	L	Q	R	Y	M	N	L	A	G	G	Y	S	G	H	S	G	D	Y	S	T	G	A	A	Q	V	I	M	P	H	V	V	G	S	V	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	W	D	E	A	L	D	L	V	A	R	E	L	K	R	V	Q	E	S	Y	G	P	T	G	T	F	G	G	S	Y	G	W	K	S	P	G	R	L	H	N	C	Q	V	L	M	R	R	A	L	N	L	A	G	G	F	V	N	S	S	G	D	Y	S	T	A	A	A	Q	I	I	M	P	H	V	M	G	T	L	E	V
Template Known Secondary structure																							G	G	G													S	S															T			B				S		S	S	S	T	T									T	S	S			T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		Y	E	Q	Q	T	S	W	P	L	I	L	E	N	S	Q	V	V	V	L	W	G	M	N	P	L	N	T	L	K	I	A	W	S	S	T	D	E	Q	G	L	E	Y	F	H	Q	L	K	K	S	G	K	P	V	I	A	I	D	P	I	R	S	E	T	I	E	F	.	F	D	D	N	A	T	W	I	A	P	N	M	G
Query Conservation																																																																				.
Alig confidence																																																						.														.			.	.	.
Template Conservation																																																						.																	.	.	.
Template Sequence		Y	E	Q	Q	T	A	W	P	V	V	V	E	N	T	D	L	M	V	F	W	A	A	D	P	M	K	T	N	E	I	G	W	V	I	P	D	H	G	A	Y	A	G	M	K	A	L	K	E	K	G	T	R	.	V	I	I	N	P	V	R	T	E	T	A	D	Y	F	G	A	.	.	.	D	V	V	S	P	R	P	Q
Template Known Secondary structure		T	S			S										S						S							T	T			S	S	B																T			.					S	B									T		.	.	.							T	T
Template Predicted Secondary structure																																																						.																	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.				.	.	.	.	.	.	.	240
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	V	A	L	M	L	G	I	A	H	T	L	M	T	Q	G	K	H	D	K	V	F	L	E	K	Y	T	T	G	Y	P	Q	F	E	E	Y	L	T	G	K	S	D	N	T	P	K	S	A	V	W	A	A	E	I	T	G	V	P	E	A	Q	I	V	K	L	A	E	L	M	A	A	N	R	T	M	L	M	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	D	V	A	L	M	L	G	M	A	H	T	L	Y	S	E	D	L	H	D	K	D	F	L	E	N	C	T	T	G	F	D	L	F	A	A	Y	L	T	G	E	S	D	G	T	P	K	T	A	E	W	A	A	E	I	C	G	L	P	A	E	Q	I	R	E	L	A	R	S	F	V	A	G	R	T	M	L	A	A	G
Template Known Secondary structure																	T	T		S																				T	T	T	T	T	S														S														S	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	G	I	Q	R	Q	Q	Y	G	E	Q	K	H	W	M	L	V	T	L	A	A	M	L	G	Q	I	G	T	P	G	G	G	F	G	F	S	Y	H	Y	S	N	G	G	N	P	T	R	V	G	G	V	L	P	E	M	S	A	A	I	A	G	H	A	S	E	A	A	D	D	G	G	M	T	A	I	P	V	A	R	I
Query Conservation
Alig confidence																																																																		.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.
Template Sequence		W	S	I	Q	R	M	H	H	G	E	Q	A	H	W	M	L	V	T	L	A	S	M	I	G	Q	I	G	L	P	G	G	G	F	G	L	S	Y	H	Y	S	N	G	G	S	P	T	S	D	G	P	A	L	G	G	I	S	D	G	G	E	G	G	A	T	.	.	.	.	.	.	.	.	.	S	I	P	C	A	R	V
Template Known Secondary structure		S	G	G	G	S	S	T	T	T															T		T	T	S	T	T					S		T	T	S	T	T	T	T	S				S																S	.	.	.	.	.	.	.	.	.				G	G	G
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.										.	.	.	.	390	.	.
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	A	L	E	N	P	G	G	K	Y	Q	H	N	G	K	E	Q	T	Y	P	N	I	K	M	I	W	W	A	G	G	G	N	F	T	H	H	Q	D	T	N	R	L	I	K	A	W	Q	K	P	E	M	I	V	V	S	E	C	Y	W	T	A	A	A	K	H	A	D	I	V	L	P	I	T	T	S	F	E	R	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	M	L	L	N	P	G	G	E	F	Q	F	N	G	A	T	A	T	Y	P	D	V	K	L	A	Y	W	A	G	G	N	P	F	A	H	H	Q	D	R	N	R	M	L	K	A	W	E	K	L	E	T	F	I	V	Q	D	F	Q	W	T	A	T	A	R	H	A	D	I	V	L	P	A	T	T	S	Y	E	R	N
Template Known Secondary structure								T	T						T	T															S							S	S									G	G	G		S							S	B							T		S					B			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
		513	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	T	M	T	G	D	Y	S	N	Q	H	I	V	P	M	K	Q	A	V	A	P	Q	F	E	A	R	N	D	F	D	V	F	A	D	L	A	E	L	L	K	P	G	G	K	E	I	Y	T	E	G	K	D	E	M	A	W	L	K	F	F	Y	D	A	A	Q	K	G	A	R	A	Q	R	V	T	M	P	M	F	N
Query Conservation
Alig confidence																																													.	.
Template Conservation																																													.	.
Template Sequence		D	I	E	S	V	G	D	Y	S	N	R	A	I	L	A	M	K	K	V	V	D	P	L	Y	E	A	R	S	D	Y	D	I	F	A	A	L	A	E	R	L	G	K	G	.	.	A	E	F	T	E	G	R	D	E	M	G	W	I	S	S	F	Y	E	A	A	V	K	Q	A	E	F	K	N	V	A	M	P	S	F	E
Template Known Secondary structure								T	T	T											S				T	T		B													T	T			.	.					T	T																					T	T
Template Predicted Secondary structure																																													.	.
Template SS confidence
		483	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.			.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
		593	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.		.	.	.	.	.	670	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		A	F	W	Q	Q	N	K	L	I	E	M	R	H	S	E	K	N	E	Q	Y	V	R	Y	G	D	F	R	A	D	P	V	K	N	A	L	G	T	P	S	G	K	I	E	I	Y	S	K	T	L	E	K	F	G	Y	K	D	C	P	A	H	P	T	W	L	A	P	D	E	W	K	G	T	.	A	D	E	K	Q	L	Q
Query Conservation																																																																										.
Alig confidence																	.	.																																																								.
Template Conservation																	.	.
Template Sequence		D	F	W	S	E	G	I	V	E	F	P	I	T	E	G	.	.	A	N	F	V	R	Y	A	D	F	R	E	D	P	L	F	N	P	L	G	T	P	S	G	L	I	E	I	Y	S	K	N	I	E	K	M	G	Y	D	D	C	P	A	H	P	T	W	M	E	P	A	E	R	L	G	G	A	G	A	K	Y	P	L	H
Template Known Secondary structure														S	G	G	.	.	G	G			T	T							T	T	T	S			S	S	T	T	S	S			S	S										T	T	S		S	S							S	S		T	T		T	T			S	S
Template Predicted Secondary structure																	.	.
Template SS confidence
		561	.	.	.	.	.	.	.	.	570	.	.	.	.	.			.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.
		672	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	T	A	H	P	A	H	R	L	H	S	Q	L	N	Y	A	E	L	R	K	K	Y	A	I	A	D	R	E	P	I	T	I	H	T	E	D	A	A	R	F	G	I	A	N	G	D	L	V	R	V	W	N	K	R	G	Q	I	L	T	G	A	V	V	T	D	G	I	K	K	G	V	V	C	V	H	E	G	A	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	A	S	H	P	K	S	R	L	H	S	Q	L	N	G	T	S	L	R	D	L	Y	A	V	A	G	H	E	P	C	L	I	N	P	A	D	A	A	A	R	G	I	A	D	G	D	V	L	R	V	F	N	D	R	G	Q	I	L	V	G	A	K	V	S	D	A	V	M	P	G	A	I	Q	I	Y	E	G	G	W
Template Known Secondary structure								S	S	S	B	T	T	B	T	T	T	S	G	G	G	G	G	T		B	T	T	B												T	T	T			T	T								S	S											T	T	B		T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		639	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.
		752	.	.	.	.						.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.
Query SS confidence							.	.	.	.	.
Query Sequence		P	D	L	E	N	.	.	.	.	.	G	L	C	K	N	G	S	A	N	V	L	T	A	D	I	P	S	S	Q	L	A	N	A	C	A	G	N	S	A	L	V	Y	I	E	K	Y	T	G	N	A	P	K	L	T	A	F	D	Q	P
Query Conservation							.	.	.	.	.
Alig confidence							.	.	.	.	.
Template Conservation
Template Sequence		Y	D	P	L	D	P	S	E	E	G	T	L	D	K	Y	G	D	V	N	V	L	S	L	D	V	G	T	S	K	L	A	Q	G	N	C	G	Q	T	I	L	A	D	V	E	K	Y	A	G	A	P	V	T	V	T	V	F	D	T	P
Template Known Secondary structure				B	S		T	T	S	T	T			B	S	S			G	G	G	S						S		T	T	T					T	T											S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		719	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.