 |
Job Description | P31802 | Confidence | 94.89% | Date | Thu Jan 5 11:48:42 GMT 2012 |
Rank | 162 | Aligned Residues | 60 |
% Identity | 33% | Template | d1ys7a1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| C-terminal effector domain of the bipartite response regulators
| PhoB-like
|
Resolution | 1.58 |
|
 |
  |   |
153 | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | |
|
|
|
. | 170 | . | . | . | . | . | . | . | . | . | |
|
|
|
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | L | T | E | R | E | L | D | V | L | H | E | L | A | Q | G | . |
. |
. |
. |
L | S | N | K | Q | I | A | S | V | L | N | . |
. |
. |
. |
I | S | E | Q | T | V | K | V | H | I | R | N | L | L | R | K | L | N | V | R | S | R | V | A | A | T | I | L | F | L | Q | Q | R | G | A | Q |
Query Conservation |   |
  |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
| . | . | . | . |   |
|   |   |   |
|
|   |   |
|   | . | . | . | . |
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |
|
|
|
|   |
|
|   |
|
|   |   |   |
|   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|
|
|
|   |   |   |   |   | . | . | . |   |
|   |
|
|   |
|   |
|
|   |
Template Sequence |   |
D | L | T | K | R | E | F | D | L | L | A | V | L | A | E | H | K | T | A | V | L | S | R | A | Q | L | L | E | L | V | W | G | Y | D | F | A | D | T | N | V | V | D | V | F | I | G | Y | L | R | R | K | L | E | A | G | P | R | . |
. |
. |
L | L | H | T | V | R | G | V | G | F | V |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
| B |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . |
|  |  |  |  | T | T | T |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
159 | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | |
|
|
. | . | . | . | 220 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|