 |
Job Description | P31802 | Confidence | 80.63% | Date | Thu Jan 5 11:48:42 GMT 2012 |
Rank | 237 | Aligned Residues | 44 |
% Identity | 18% | Template | d1p6ra_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Penicillinase repressor
|
Resolution | UNK |
|
  |   |
152 | . | . | . | . | . | . | . | 160 | . | . | . | . | . | |
|
. | . | . | . | 170 | . | . | . | . | . | . | . | . | |
|
|
|
. | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|  |  |  |  |  |  |  |  | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | V | L | T | E | R | E | L | D | V | L | H | E | L | . |
. |
A | Q | G | L | S | N | K | Q | I | A | S | V | L | . |
. |
. |
. |
N | I | S | E | Q | T | V | K | V | H | I | R | N | L | L | R | K |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |
|   |   |   |   | . | . |   |   |
|   |
|   |   |   |
|
|   |   |
| . | . | . | . |   |
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |
|   |   |
|
|   |   |
|
|   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|   |
|   |
|   |
|
|   |   |
|
Template Sequence |   |
P | Q | I | S | D | A | E | L | E | V | M | K | V | I | W | K | H | S | S | I | N | T | N | E | V | I | K | E | L | S | K | T | S | T | W | S | P | K | T | I | Q | T | M | L | L | R | L | I | K | K |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | T | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|