 |
Job Description | P31802 | Confidence | 52.86% | Date | Thu Jan 5 11:48:42 GMT 2012 |
Rank | 477 | Aligned Residues | 65 |
% Identity | 17% | Template | d1iy9a_ |
SCOP info | S-adenosyl-L-methionine-dependent methyltransferases
| S-adenosyl-L-methionine-dependent methyltransferases
| Spermidine synthase
|
Resolution | 2.30 |
|
 |
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | |
|
|
|
. | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | V | M | I | V | D | D | H | P | L | M | R | R | G | V | R | Q | L | L | . |
. |
. |
. |
E | L | D | P | G | S | E | V | V | A | E | A | G | D | G | A | S | A | I | D | L | A | N | R | L | D | I | D | V | I | L | L | D | L | N | M | K | G | M | S | G | L | D | T | L | N | A |
Query Conservation |   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
| . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|
|   |   |   |
|   |   |   |   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |   | . |   |
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
Template Sequence |   |
K | A | T | L | V | D | I | D | G | K | V | I | E | Y | S | K | K | F | L | P | S | I | A | G | K | L | D | D | P | R | V | D | V | Q | V | D | D | G | F | M | H | I | A | K | S | E | N | . |
Q | Y | D | V | I | M | V | D | S | T | E | P | V | G | P | A | V | N | L | F | T | K |
Template Known Secondary structure |   |
 |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |
|  |  |  |  | T | T | T | T | S | T | T |  |  |  |  |  | S |
| S |  |  |  |  |  | T |
|
| S | . |
|  |  |  |  |  |  | S |
| S | S |
|
| S |
|
|
|
|
| S | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
| . |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
102 | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | |
. | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|