 |
Job Description | P31802 | Confidence | 95.20% | Date | Thu Jan 5 11:48:42 GMT 2012 |
Rank | 159 | Aligned Residues | 62 |
% Identity | 27% | Template | c2k4jA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:putative transcriptional regulator; |
PDBTitle: arsr dna binding domain
|
Resolution | UNK |
|
 |
  |   |
154 | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | |
|
|
|
. | 170 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|  |  |  |  |  |  |  |  |
| . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | T | E | R | E | L | D | V | L | H | E | L | A | Q | G | . |
. |
. |
. |
L | S | N | K | Q | I | A | S | V | L | N | . |
. |
. |
. |
. |
I | S | E | Q | T | V | K | V | H | I | R | N | L | L | R | K | L | N | V | R | S | R | V | A | A | T | I | L | F | L | Q | Q | R | G | A | Q |
Query Conservation |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
| . | . | . | . |   |
|   |   |   |
|
|   |   |
|   | . | . | . | . | . |
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |
|
|
|
|   |
|
|   |
|
|   |   |   |
|   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |
|
|   |
Template Sequence |   |
L | T | R | A | E | Y | E | I | L | S | L | L | I | S | K | K | G | Y | V | F | S | R | E | S | I | A | I | E | S | E | S | I | N | P | E | S | S | N | K | S | I | D | V | I | I | G | R | L | R | S | K | I | E | K | N | P | K | Q | P | Q | Y | I | I | S | V | R | G | I | G | Y | K |
Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|  |  |  |  |  |  |  | T |
|
| S | S |
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |
|
|
| S | S |
|  |  |  | T | T | T |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
42 | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|