Job Description P31802 Confidence 99.92% Date Thu Jan 5 11:48:42 GMT 2012 Rank 6 Aligned Residues 210 % Identity 23% Template c2gwrA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:dna-binding response regulator mtra; PDBTitle: crystal structure of the response regulator protein mtra from2 mycobacterium tuberculosis Resolution 2.10 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	T	P	F	Q	V	M	I	V	D	D	H	P	L	M	R	R	G	V	R	Q	L	L	E	L	D	P	G	S	E	V	V	A	E	A	G	D	G	A	S	A	I	D	L	A	N	R	L	D	I	D	V	I	L	L	D	L	N	M	K	G	M	S	G	L	D	T	L	N	A	L	R	R	D	G	V	T	A	Q
Query Conservation
Alig confidence																														.	.																																													.
Template Conservation																														.	.																																													.
Template Sequence		D	T	X	R	Q	R	I	L	V	V	D	D	D	A	S	L	A	E	X	L	T	I	V	L	R	G	E	G	.	.	F	D	T	A	V	I	G	D	G	T	Q	A	L	T	A	V	R	E	L	R	P	D	L	V	L	L	D	L	X	L	P	G	X	N	G	I	D	V	C	R	V	L	R	A	.	D	S	G	V	P
Template Known Secondary structure													S															T	T	.	.									G	G	G											S						S	S		S	S	S											T	.	T
Template Predicted Secondary structure																														.	.																																													.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.
Query SS confidence																																																								.	.	.	.
Query Sequence		I	I	I	L	T	V	S	D	A	S	S	D	V	F	A	L	I	D	A	G	A	D	G	Y	L	L	K	D	S	D	P	E	V	L	L	E	A	I	R	A	G	A	K	G	S	K	V	F	S	E	R	V	N	Q	.	.	.	.	Y	L	R	E	R	E	M	F	G	A	E	E	D	P	F	S	V	L	T	E	R	E
Query Conservation																																																								.	.	.	.
Alig confidence																																																								.	.	.	.
Template Conservation
Template Sequence		I	V	X	L	T	A	K	T	D	T	V	D	V	V	L	G	L	E	S	G	A	D	D	Y	I	X	K	P	F	K	P	K	E	L	V	A	R	V	R	A	R	L	R	R	N	D	D	E	P	A	E	X	L	S	I	A	D	V	E	I	D	V	P	A	H	K	V	T	R	N	G	E	Q	I	S	L	T	P	L	E
Template Known Secondary structure								T	T			S								T	T								S																		S	S									T	T					T	T	T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.				.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure												.	.	.	.											.	.	.
Query SS confidence												.	.	.	.											.	.	.
Query Sequence		L	D	V	L	H	E	L	A	Q	G	.	.	.	.	L	S	N	K	Q	I	A	S	V	L	.	.	.	N	I	S	E	Q	T	V	K	V	H	I	R	N	L	L	R	K	L	N	V	R	S	R	V	A	A	T	I	L	F	L	Q	Q	R	G	A	Q
Query Conservation												.	.	.	.											.	.	.
Alig confidence												.	.	.	.											.	.	.
Template Conservation
Template Sequence		F	D	L	L	V	A	L	A	R	K	P	R	Q	V	F	T	R	D	V	L	L	E	Q	V	W	G	Y	R	A	D	T	R	L	V	N	V	H	V	Q	R	L	R	A	K	V	E	K	D	P	E	N	P	T	V	V	L	T	V	R	G	V	G	Y	K
Template Known Secondary structure											S	T	T			B										T						T																S	S	T	T	S		S	S					T	T	T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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