 |
Job Description | P0A836 | Confidence | 43.62% | Date | Thu Jan 5 11:06:47 GMT 2012 |
Rank | 197 | Aligned Residues | 76 |
% Identity | 34% | Template | d1xdpa3 |
SCOP info | Phospholipase D/nuclease
| Phospholipase D/nuclease
| Polyphosphate kinase C-terminal domain
|
Resolution | 2.50 |
|
 |
  |   |
296 | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | |
|
|
|
. | . | 360 | . | . | . | . | . | . | . | . | |
. | 370 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . |  |  |  |  |  |  |
|
|
|
|  | . |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
Query Sequence |   |
E | R | V | T | E | A | F | K | I | I | L | S | D | D | K | V | K | A | V | L | V | N | I | F | G | G | I | V | R | C | D | L | I | A | D | G | I | I | G | A | V | A | E | V | G | V | N | V | P | V | V | V | R | L | E | G | N | N | A | E | L | G | . |
. |
. |
. |
A | K | K | L | A | D | S | G | L | N | I | . |
I | A |
Query Conservation |   |
|   |   |   |   |
|
|   |
|   |
|   |
|   |   |
|   |   |
|
|
|   |
|   |
|
|
|   |   |   |   |   |
|
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |
|   |   |   |   |
|   | . | . | . | . |   |   |   |
|   |   |   |
|
|
|   | . |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
Template Conservation |   |
  |   |
|
|   |   |
|   |   |
|
|   |
|   |   |
|   |
|
|   |
|
|   |
| . |   |
|   |   |
|
|   |
|
|   |
|
|   |   |
|
|   |
| . |
|
|   |
|   |
|
|
|
|   |
|
|
|   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |
|
|
|   |
|   |   |   |
Template Sequence |   |
E | H | V | L | E | L | L | R | Q | A | S | F | D | P | S | V | L | A | I | K | I | N | I | Y | . |
R | V | A | K | D | S | R | I | I | D | S | M | I | H | A | A | H | N | . |
G | K | K | V | T | V | V | V | E | L | Q | A | R | F | D | E | E | A | N | I | H | W | A | K | R | L | T | E | A | G | V | H | V | I | F | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
| T | T |  |  |  |  |  |  |  |  | S | . | S |
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  | T | . | T |
|  |  |  |  |  |  |
| T | T |
| S | S | T | T | T | T | T | T | T | T | T |  |  |  |  |  |  | T |
|  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  | . |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
351 | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | |
. | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | |
. | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . |
  |
  |   |
371 | . | . |
Predicted Secondary structure |   |
|
|
|
Query SS confidence |   |
|
|
|
Query Sequence |   |
A | K | G |
Query Conservation |   |
  |   |   |
Alig confidence |   |
|
|
|
Template Conservation |   |
  |   |   |
Template Sequence |   |
A | P | G |
Template Known Secondary structure |   |
| T | T |
Template Predicted Secondary structure |   |
|
|
|
Template SS confidence |   |
|
|
|
  |   |
429 | 430 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|