 |
Job Description | P0A836 | Confidence | 29.46% | Date | Thu Jan 5 11:06:47 GMT 2012 |
Rank | 263 | Aligned Residues | 35 |
% Identity | 17% | Template | d1b04a_ |
SCOP info | ATP-grasp
| DNA ligase/mRNA capping enzyme, catalytic domain
| Adenylation domain of NAD+-dependent DNA ligase
|
Resolution | 2.80 |
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . |
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | E | Y | Q | A | K | Q | L | F | A | R | Y | G | L | P | A | . |
P | V | G | Y | A | C | T | T | P | R | E | A | E | E | A | A | S | K | I |
Query Conservation |   |
  |
|   |
|
|
|   |
|
|   |   |
|
|
|
|
| . |
|   |   |   |   |   |   |   |   |
|
|
|   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
|   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
Template Sequence |   |
S | H | S | E | A | L | D | Y | L | Q | A | L | G | F | K | V | N | P | E | R | R | R | C | A | N | I | D | E | V | I | A | F | V | S | E | W |
Template Known Secondary structure |   |
B |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
| T | T |
|  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
233 | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|