|   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | Q | L | F | A | R | Y | G | L | P | A | P | V | G | Y | A | C | T | T | P | R | E | A | E | E | A | A | S | K | I | G | A | G | P | W | V | V | K | C | Q | V | H | A | G | G | R | G | K | A | G | G | V | K | V | V | N | S | K | E | D | I | R | A | F | A | E | N | W | L | G | K | R | L | V | T | Y | Q | T | D | A |
Query Conservation |   |
|   |
|
|   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |
|
|
|   |   |   |
|   |   |
|
|   |   |
|
|
|
|
|   |
|
|   |   |
|   |
|   |
|   |
|
|
|   |
|   |   |   |   |
|
|   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |
|   |   |   |
|
|
|   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
| . |   |
|   |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |
|   |   |   |   |
|
|   |   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
Q | H | A | V | E | R | L | K | L | K | Q | P | A | N | A | T | V | T | A | I | E | M | A | V | E | K | A | K | E | I | G | . |
Y | P | L | V | V | R | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | M | E | I | V | Y | D | E | A | D | L | R | R | Y | F | Q | T | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T |
|
|
|
|
|  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |
| . | S | S |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |
| S |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
679 | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | |
710 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
  |
  |   |
89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | |
. | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | G | Q | P | V | N | Q | I | L | V | E | A | A | T | D | I | A | K | E | L | Y | L | G | A | V | V | D | R | S | S | R | R | V | V | F | M | A | S | T | E | G | G | V | E | I | E | K | V | A | E | E | T | P | H | L | I | H | K | V | A | L | D | P | L | . |
T | G | P | M | P | Y | Q | G | R | E | L | A | F | K | L |
Query Conservation |   |
  |
|   |   |
|   |   |
|
|
|
|   |   |
|   |   |   |   |
|
|
|
|
|
|   |   |
|   |   |   |
|   |   |
|
|   |
|
|   |   |
|
|
|   |
|
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
. | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . |   |   |   |
|
|   |
|   |   |
|   |
|   |
|
|   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|   |   |   |
|
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
V | L | L | D | H | F | L | D | D | A | V | E | V | D | V | D | A | I | C | D | G | E | . |
. |
M | V | L | I | G | G | I | M | E | H | I | E | Q | A | G | V | H | S | G | D | S | A | C | S | L | P | A | Y | T | L | S | Q | E | I | Q | D | V | M | R | Q | Q | V | Q | K | L | A | F | E | L |
Template Known Secondary structure |   |
. | . | . | . | . | . | . |
|  |  |  | B |
|
| T | T |
|  |  |  |  |  |  |  |  |  |
| S | S | . | . |
|  |  |  |  |  |  |  |  |  | S | S |
| T | T | S |
| G | G | G |
|
|  |  |  | S |
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
| . | . |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | |
|
. | . | . | . | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 | . | . | . | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | . | . | . | . | . | . | 820 |
  |
  |   |
168 | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | L | E | G | K | L | V | Q | Q | F | T | K | I | F | M | G | L | A | T | I | F | L | E | R | D | L | A | L | I | E | I | N | P |
Query Conservation |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |
|   |
|   |   |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |
|
|   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|
|
|
|
|
|
Template Sequence |   |
Q | V | R | G | L | M | N | V | Q | F | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
V | K | N | N | E | V | Y | L | I | E | V | N | P |
Template Known Secondary structure |   |
T |
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |
| S | S |
|  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |
|
|  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
821 | . | . | . | . | . | . | . | . | 830 | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 840 | . | . | . | . |
  |