Job Description P0A836 Confidence 98.24% Date Thu Jan 5 11:06:47 GMT 2012 Rank 57 Aligned Residues 149 % Identity 11% Template c3tqtB_ PDB info PDB header:ligase Chain: B: PDB Molecule:d-alanine--d-alanine ligase; PDBTitle: structure of the d-alanine-d-alanine ligase from coxiella burnetii Resolution 1.88 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.						.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																		.	.	.	.	.
Query SS confidence																																		.	.	.	.	.
Query Sequence		Y	Q	A	K	Q	L	F	A	R	Y	G	L	P	A	P	V	G	Y	A	C	T	T	P	R	E	A	E	E	A	A	S	K	.	.	.	.	.	I	G	A	G	P	W	V	V	K	C	Q	V	H	A	G	G	R	G	K	A	G	G	V	K	V	V	N	S	K	E	D	I	R	A	F	A	E	N	W	L	G	K	R
Query Conservation																																		.	.	.	.	.
Alig confidence																																		.	.	.	.	.			.															.	.	.	.
Template Conservation																																									.															.	.	.	.
Template Sequence		D	L	T	K	T	V	L	R	A	G	G	I	P	V	V	D	W	H	T	L	S	P	R	D	A	T	E	G	V	Y	Q	R	L	L	D	R	W	G	T	.	S	E	L	F	V	K	A	V	S	L	G	S	S	V	.	.	.	.	A	T	L	P	V	K	T	E	T	E	F	T	K	A	V	K	E	V	F	R	Y	D
Template Known Secondary structure											T	T			B								T	T	S			T	T										S		.	S							S	S			S	G	G	.	.	.	.	G						S												T	T	T
Template Predicted Secondary structure																																									.															.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.					.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	T	Y	Q	T	D	A	N	G	Q	P	V	N	Q	I	L	V	E	A	A	T	D	I	A	K	E	L	Y	L	G	A	V	V	D	R	S	S	R	R	V	V	F	M	A	S	T	E	G	G	V	E	I	E	K	V	A	E	E	T	P	H	L	I	H	K	V	A	L	D	P	L	T	G	P	M	P	Y	Q	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.											.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.											.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	L	M	V	E	P	R	I	R	.	G	R	E	I	E	C	A	V	L	G	N	G	A	P	K	A	S	L	P	G	E	I	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	S										.	S										S	S	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.											.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															217	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	L	A	F	K	L	G	L	E	G	K	L	V	Q	Q	F	T	K	I	F	M	G	L	A	T	I	F	L	E	R	D	L	A	L	I	E	I	N	P	L	V	I	T	K	Q	G	D	L	I	C	L	D	G
Query Conservation
Alig confidence		.	.	.	.	.	.																																	.	.	.
Template Conservation		.	.	.	.	.	.																																	.	.	.
Template Sequence		.	.	.	.	.	.	T	T	T	S	E	S	V	T	K	Q	I	Q	Q	I	A	I	D	A	F	K	M	V	H	C	S	G	M	A	R	V	D	F	.	.	.	F	V	T	P	N	N	K	V	L	V	N	E	I
Template Known Secondary structure		.	.	.	.	.	.																						T	T										.	.	.				T	T
Template Predicted Secondary structure		.	.	.	.	.	.																																	.	.	.
Template SS confidence
								269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300				.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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