Job Description P0A836 Confidence 97.81% Date Thu Jan 5 11:06:47 GMT 2012 Rank 75 Aligned Residues 142 % Identity 15% Template c3r23B_ PDB info PDB header:ligase Chain: B: PDB Molecule:d-alanine--d-alanine ligase; PDBTitle: crystal structure of d-alanine--d-alanine ligase from bacillus2 anthracis Resolution 2.50 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	A	K	Q	L	F	A	R	Y	G	L	P	A	P	V	G	Y	A	C	T	T	P	R	E	A	E	E	A	A	S	K	I	G	A	G	P	W	V	V	K	C	Q	V	H	A	G	G	R	G	K	A	G	G	V	K	V	V	N	S	K	E	D	I	R	A	F	A	E	N	W	L	G	K	R	L	V	T	Y	Q
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.																								.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.																								.	.	.	.	.
Template Sequence		N	I	S	K	K	I	L	R	Y	E	G	I	E	T	P	D	W	I	E	L	T	K	X	E	D	L	N	F	D	E	L	D	K	L	G	F	P	L	V	V	K	P	N	S	.	.	.	.	.	.	.	.	G	G	V	K	I	V	Y	D	K	D	E	L	I	S	X	L	E	T	V	F	E	W	D	.	.	.	.	.
Template Known Secondary structure											T	T											S	S	S								T	T	T		S	S						S		.	.	.	.	.	.	.	.								S	T	T														.	.	.	.	.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.																								.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.									140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																																.	.
Query SS confidence																																																.	.
Query Sequence		T	D	A	N	G	Q	P	V	N	Q	I	L	V	E	A	A	T	D	I	A	K	E	L	Y	L	G	A	V	V	D	R	S	S	R	R	V	V	F	M	A	S	T	E	G	G	V	.	.	E	I	E	K	V	A	E	E	T	P	H	L	I	H	K	V	A	L	D	P	L	T	G	P	M	P	Y	Q	G	R	E	L
Query Conservation																																																.	.
Alig confidence		.	.	.	.	.	.	.	.											.																						.	.					.	.
Template Conservation		.	.	.	.	.	.	.	.											.																						.	.
Template Sequence		.	.	.	.	.	.	.	.	S	E	V	V	I	E	K	Y	I	K	.	G	E	E	I	T	C	S	I	F	D	G	K	Q	L	P	I	I	S	I	R	H	.	.	A	A	E	F	F	D	Y	N	A	K	Y	D	D	A	S	T	I	E	E	V	I	E	L	P	A	E	L	K	E	R	V	N	K	A	S	L	A	C
Template Known Secondary structure		.	.	.	.	.	.	.	.	S										.	S									T	T											.	.						T	T	T	T				S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.											.																						.	.
Template SS confidence
										167	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.			.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		164	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	K	L	G	L	E	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	K	A	L	K	C	S	V
Template Known Secondary structure					T	T			S
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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