 |
Job Description | P0A836 | Confidence | 67.28% | Date | Thu Jan 5 11:06:47 GMT 2012 |
Rank | 129 | Aligned Residues | 90 |
% Identity | 17% | Template | c3oirA_ |
PDB info |
PDB header:transport protein | Chain: A: PDB Molecule:sulfate transporter sulfate transporter family protein; |
PDBTitle: crystal structure of sulfate transporter family protein from wolinella2 succinogenes
|
Resolution | 1.85 Å |
|
 |
  |   |
293 | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | |
|
|
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
Query Sequence |   |
A | T | K | E | R | V | T | E | A | F | K | I | I | L | S | D | D | K | V | K | A | V | L | V | N | I | F | G | G | I | V | R | C | D | L | I | A | D | G | I | I | G | A | V | A | E | V | G | V | N | V | P | V | V | V | R | L | E | G | N | N | A | E | L | G | A | K | K | L | A | D | S | G | L | N | I | I | . |
. |
. |
Query Conservation |   |
|   |   |
|   |   |   |   |
|
|   |
|   |
|   |
|   |   |
|   |   |
|
|
|   |
|   |
|
|
|   |   |   |   |   |
|
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |
|   |   |   |   |
|   |   |   |   |
|   |   |   |
|
|
|   |   | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   | . | . | . |   |
|
|
|
|   |   |   |
|   |   |
|
|
|
|
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |
| . |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |
Template Sequence |   |
G | V | A | D | R | L | K | G | V | L | D | V | I | E | E | T | P | K | . |
. |
. |
V | F | I | L | R | X | R | R | V | P | V | I | D | A | T | G | X | H | A | L | W | E | F | Q | E | S | C | E | K | R | G | T | I | L | L | L | S | G | V | S | D | R | L | . |
Y | G | A | L | N | R | F | G | F | I | E | A | L | G | E |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T |  |  |  |  |
| S | S |
|
| S | . | . | . |  |  |  |  |  |
| T | T |
| S |
| B |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  | S |
|
|  |  |  | . |  |  |  |  |  |  | T | T |  |  |  |  |  |
| G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . |  |  |  |  |  |
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  | . |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
466 | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | |
|
|
. | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | |
. | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . |
  |
  |   |
|
|
370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
A | A | K | G | L | T | D | A | A | Q | Q | V | V | A | A | V | E |
Query Conservation |   |
. | . |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |
Template Sequence |   |
E | R | V | F | D | H | I | D | K | A | L | A | Y | A | K | L | L | V | E |
Template Known Secondary structure |   |
G | G | B |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
542 | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|