Job Description P0A836 Confidence 100.00% Date Thu Jan 5 11:06:47 GMT 2012 Rank 3 Aligned Residues 371 % Identity 25% Template c3mwdA_ PDB info PDB header:transferase Chain: A: PDB Molecule:atp-citrate synthase; PDBTitle: truncated human atp-citrate lyase with citrate bound Resolution 2.10 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.						.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.						.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure															.	.	.	.	.																							.	.	.	.	.
Query SS confidence															.	.	.	.	.																							.	.	.	.	.
Query Sequence		L	H	E	Y	Q	A	K	Q	L	F	A	R	Y	.	.	.	.	.	G	L	P	A	P	V	G	Y	A	C	T	T	P	R	E	A	E	E	A	A	S	K	.	.	.	.	.	I	G	A	G	P	W	V	V	K	C	Q	V	H	A	G	G	R	G	K	A	G	G	V	K	V	V	N	S	K	E	D	I	R	A	F
Query Conservation															.	.	.	.	.																							.	.	.	.	.
Alig confidence															.	.	.	.	.																							.	.	.	.	.			.
Template Conservation																																																	.
Template Sequence		I	S	E	Q	T	G	K	E	L	L	Y	K	F	I	C	T	T	S	A	I	Q	N	R	F	K	Y	A	R	V	T	P	D	T	D	W	A	R	L	L	Q	D	H	P	W	L	L	S	.	Q	N	L	V	V	K	P	D	Q	L	I	K	R	R	G	K	L	G	L	V	G	V	N	L	T	L	D	G	V	K	S	W
Template Known Secondary structure																		S	S		B		S	T	T							T	T											G	G	G	G	T	.	S								S	S		S		T	T	T	T	T
Template Predicted Secondary structure																																																	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		A	E	N	W	L	G	K	R	L	V	T	Y	Q	T	D	A	N	G	Q	P	V	N	Q	I	L	V	E	A	A	T	.	.	D	I	A	K	E	L	Y	L	G	A	V	V	D	R	S	S	R	R	V	V	F	M	A	S	T	E	G	G	V	E	I	E	K	V	A	E	E	T	P	H	L	I	H	K	V	A	L	D
Query Conservation																																.	.
Alig confidence																		.	.	.												.	.																								.	.																			.	.
Template Conservation																		.	.	.																																					.	.																			.	.
Template Sequence		L	K	P	R	L	G	Q	E	A	T	V	G	K	A	T	G	.	.	.	F	L	K	N	F	L	I	E	P	F	V	P	H	S	Q	A	E	E	F	Y	V	C	I	Y	A	T	R	E	G	D	Y	V	L	F	H	H	.	.	E	G	G	V	D	V	G	D	V	D	A	K	A	Q	K	L	L	V	.	.	G	V	D
Template Known Secondary structure			T	T	T	T	T						T	T				.	.	.															G	G	G										T	T								S	.	.	S		S	T	T			S					S						.	.		T	T
Template Predicted Secondary structure																		.	.	.																																					.	.																			.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	T	G	P	M	P	Y	Q	G	R	E	L	A	F	K	L	G	L	E	G	K	L	V	Q	Q	F	T	K	I	F	M	G	L	A	T	I	F	L	E	R	D	L	A	L	I	E	I	N	P	L	V	I	T	K	Q	G	D	L	I	C	L	D	G	K	L	G	A	D	G	N	A	L	F	R	Q	P	D	L	R
Query Conservation
Alig confidence																.	.	.																																									.																					.	.
Template Conservation																.	.	.																																									.																					.	.
Template Sequence		E	K	L	N	P	E	D	I	K	K	H	L	L	V	.	.	.	H	A	P	E	D	K	K	E	I	L	A	S	F	I	S	G	L	F	N	F	Y	E	D	L	Y	F	T	Y	L	E	I	N	P	L	V	V	T	K	D	G	.	V	Y	V	L	D	L	A	A	K	V	D	A	T	A	D	Y	I	C	K	V	.	.
Template Known Secondary structure												T	T	T	T	.	.	.	T	S		T	T	T																		T	T													T	T		.												G	G	G							.	.
Template Predicted Secondary structure																.	.	.																																									.																					.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.				.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.																.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.			.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Query Sequence		E	M	R	D	Q	S	Q	E	D	P	R	E	A	Q	A	A	Q	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	N	Y	V	A	L	D	G	N	I	G	C	M	V	N	G	A	G	L	A	M	G	T	M	D	I	V	K	L	H	G	G	.	.	E	P	A	N	F	L	D	V	G	G	G	A
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Template Conservation
Template Sequence		K	W	G	D	I	E	F	P	P	P	F	G	R	E	A	Y	P	E	E	A	Y	I	A	D	L	D	A	K	S	G	A	S	L	K	L	T	L	L	N	P	K	G	R	I	W	T	X	V	A	G	G	G	A	S	V	V	Y	S	D	T	I	C	D	L	G	G	V	N	E	L	A	N	Y	G	E	Y	S	G	A	P
Template Known Secondary structure					S							S	S	S															T	S	S	S							S		T	T		S						B	S														T	T		G	G	G	B								S
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		294	.	.	.	.	.	300	.	.	.	.	.	.					.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.				330	.	.	.	.	.	.	.	.	.	340						.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure															.	.	.	.																								.	.	.												.	.	.	.	.
Query SS confidence															.	.	.	.																								.	.	.												.	.	.	.	.
Query Sequence		T	K	E	R	V	T	E	A	F	K	I	I	L	.	.	.	.	S	D	D	K	V	K	A	V	L	V	N	I	F	G	G	I	V	R	C	D	L	I	A	.	.	.	D	G	I	I	G	A	V	A	E	V	G	.	.	.	.	.	V	N	V	P	V	V	V	R	L	E	G	N	N	A	E	L	G	A	K	K	L
Query Conservation															.	.	.	.																								.	.	.												.	.	.	.	.
Alig confidence															.	.	.	.																								.	.	.												.	.	.	.	.
Template Conservation
Template Sequence		S	E	Q	Q	T	Y	D	Y	A	K	T	I	L	S	L	X	T	R	E	K	H	P	D	G	K	I	L	I	I	G	G	S	I	A	N	F	T	N	V	A	A	T	F	K	G	I	V	R	A	I	R	D	Y	Q	G	P	L	K	E	H	E	V	T	I	F	V	R	R	G	G	P	N	Y	Q	E	G	L	R	V	X
Template Known Secondary structure																	T	T	S	S			T	T								B		B		S	S	S																T							T	T								B	S	T	T
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
		362	.	.					.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.
Query SS confidence					.	.	.	.
Query Sequence		A	D	S	.	.	.	.	G	L	N	I	I	A	A	K	G	L	T	D	A	A	Q	Q	V	V	A	A	V	E	G	K
Query Conservation					.	.	.	.
Alig confidence					.	.	.	.										.
Template Conservation																		.
Template Sequence		G	E	V	G	K	T	T	G	I	P	I	H	V	F	G	T	.	E	T	H	X	T	A	I	V	G	X	A	L	G	H
Template Known Secondary structure									T								T	.	T	S		T	T							T	T	S
Template Predicted Secondary structure																		.
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.		.	.	410	.	.	.	.	.	.	.	.	.	420	.