Job Description P0A836 Confidence 50.45% Date Thu Jan 5 11:06:47 GMT 2012 Rank 168 Aligned Residues 109 % Identity 13% Template c3ksmA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:abc-type sugar transport system, periplasmic component; PDBTitle: crystal structure of abc-type sugar transport system, periplasmic2 component from hahella chejuensis Resolution 1.90 Å

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		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340		.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		G	T	M	D	I	V	K	L	H	G	G	E	P	A	N	F	L	D	V	G	G	G	A	T	K	E	R	V	T	E	A	F	K	I	I	L	S	D	D	K	V	K	A	V	L	V	N	I	F	G	G	I	V	R	C	D	L	I	A	D	G	I	I	G	A	V	A	E	V	G	.	V	N	V	P	V	V	V	R	L
Query Conservation																																																																								.
Alig confidence																																																.	.	.	.	.	.	.																		.
Template Conservation																																																.	.	.	.	.	.	.
Template Sequence		G	F	L	D	V	L	R	K	H	D	K	I	R	I	I	A	A	P	Y	A	G	D	D	R	G	A	A	R	S	E	X	L	R	L	L	K	E	T	P	T	I	D	G	L	F	T	.	.	.	.	.	.	.	P	N	E	S	T	T	I	G	A	L	V	A	I	R	Q	S	G	X	S	K	Q	F	G	F	I	G	F
Template Known Secondary structure								T	T		T	T								B			S	S																S								.	.	.	.	.	.	.		S														T	T		T	T	S	S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.								.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.					.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.
Query SS confidence																											.	.	.	.
Query Sequence		E	G	N	N	A	E	L	G	A	K	K	L	A	D	S	G	L	N	I	I	A	A	K	G	L	.	.	.	.	T	D	A	A	Q	Q	V	V	A	A	V	E	G	K
Query Conservation																											.	.	.	.
Alig confidence					.	.																					.	.	.	.
Template Conservation					.	.
Template Sequence		D	Q	T	.	.	E	E	L	E	A	A	X	Y	A	G	E	I	S	N	L	V	V	Q	N	P	E	Y	X	G	Y	L	A	V	Q	R	A	L	D	L	V	R	G	K
Template Known Secondary structure		S			.	.									T	T	S	S	S																							T	T
Template Predicted Secondary structure					.	.
Template SS confidence
		259	260	.			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions