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Job Description | P0A836 | Confidence | 48.98% | Date | Thu Jan 5 11:06:47 GMT 2012 |
Rank | 173 | Aligned Residues | 104 |
% Identity | 16% | Template | c3h5oB_ |
PDB info |
PDB header:transcription regulator | Chain: B: PDB Molecule:transcriptional regulator gntr; |
PDBTitle: the crystal structure of transcription regulator gntr from2 chromobacterium violaceum
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Resolution | 2.30 Å |
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273 | . | . | . | . | . | . | 280 | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query Sequence |   |
M | D | I | V | K | L | H | G | G | E | P | A | N | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
R | A | A | L | D | A | A | D | C | R | D | A | G | L | E | W | L | D | P | Q | P | S | S | X | Q | X | G | A | D | X | L | D | R | A | L | A | E | R | P | D | C | D | A | L | F | C | . |
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C | N | D | D | L | A | I | G | A | L | A | R | S | Q | Q | L | G | I | A | V | P | E | R | L | A | I | A |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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208 | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | |
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. | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 |
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351 | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | N | N | A | E | L | G | A | K | K | L | A | D | S | G | L | N | I | I | A | A | K | G | L | T | D | A | A | Q | Q | V | V | A | A | V |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
G | F | N | D | L | Q | P | A | A | W | C | T | P | . |
P | L | T | T | V | A | T | P | . |
R | R | D | I | G | V | H | A | A | K | A | L |
Template Known Secondary structure |   |
| S | B |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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281 | . | . | . | . | . | . | . | . | 290 | . | . | . | |
. | . | . | . | . | . | 300 | . | |
. | . | . | . | . | . | . | . | 310 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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