Return to main results Retrieve Phyre Job Id

Job DescriptionP0A836
Confidence48.98%DateThu Jan 5 11:06:47 GMT 2012
Rank173Aligned Residues104
% Identity16%Templatec3h5oB_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:transcriptional regulator gntr; PDBTitle: the crystal structure of transcription regulator gntr from2 chromobacterium violaceum
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   273......280..... ....290.........300.........310.........320.........330.........340.........350
Predicted Secondary structure 






..






















Query SS confidence 












. .
































































Query Sequence  MDIVKLHGGEPAN. . FLDVGGGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLE
Query Conservation   
 
   

  

..  



 
  
    

 
 
 
  
  


 
 


     

  

 
        


  
 
Alig confidence 












..






























.......


























Template Conservation                                    
       

  .......  
  
     

   
   
    
 
Template Sequence  RAALDAADCRDAGLEWLDPQPSSXQXGADXLDRALAERPDCDALFC. . . . . . . CNDDLAIGALARSQQLGIAVPERLAIA
Template Known Secondary structure  T


GGG
S



TT

.......SSTT

TTTT
Template Predicted Secondary structure 
















.......










Template SS confidence 















































































   208.210.........220.........230.........240.........250... ......260.........270.........280
 
   351........360.........370.........380.....
Predicted Secondary structure 









Query SS confidence 


































Query Sequence  GNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAV
Query Conservation 
    
    
   


         

   
   
Alig confidence 












.







.











Template Conservation    
          . 
 

   .    
  
   
Template Sequence  GFNDLQPAAWCTP. PLTTVATP. RRDIGVHAAKAL
Template Known Secondary structure 
SB

TSSS.

B

.
Template Predicted Secondary structure 






.



.
Template SS confidence 


































   281........290... ......300. ........310...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions