 |
Job Description | P0A836 | Confidence | 98.55% | Date | Thu Jan 5 11:06:47 GMT 2012 |
Rank | 44 | Aligned Residues | 99 |
% Identity | 20% | Template | c3gidB_ |
PDB info |
PDB header:ligase | Chain: B: PDB Molecule:acetyl-coa carboxylase 2; |
PDBTitle: the biotin carboxylase (bc) domain of human acetyl-coa2 carboxylase 2 (acc2) in complex with soraphen a
|
Resolution | 2.30 Å |
|
 |
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  | . | . | . | . | . | . | . | . | . |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | Q | A | K | Q | L | F | A | R | Y | G | L | P | A | P | V | G | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
A | C | T | T | P | R | E | A | E | E | A | A | S | K | I | G | A | G | P | W | V | V | K | C | Q | V | H | A | G | G | R | G | K | A | G | G | V | K | V | V | N | S | K | E | D | I | R | A | F | A | E | N | W |
Query Conservation |   |
  |
|
|
|   |
|
|   |   |
|
|
|
|
|
|   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|
|
|   |   |   |
|   |   |
|
|   |   |
|
|
|
|
|   |
|
|   |   |
|   |
|   |
|   |
|
|
|   |
|   |   |   |   |
|
|   |   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| . |   |
|   |
|
|
|
| . | . | . | . | . | . | . |   |   |
|   |
|   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |
|
Template Sequence |   |
I | A | S | T | V | V | A | Q | T | L | Q | V | P | T | L | P | W | S | G | S | G | L | T | V | E | K | G | C | V | K | D | V | D | E | G | L | E | A | A | E | R | I | G | . |
F | P | L | M | I | K | A | . |
. |
. |
. |
. |
. |
. |
S | E | G | K | G | I | R | K | A | E | S | A | E | D | F | P | I | L | F | R | Q | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
|
| B |
|
| B | T | T | T | T |
|
|
|
|
|
|
| B |
| S |  |  |  |  |  |  |  |  |  |  |  |
| . | S | S |  |  |  |  |  | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |
| S | T | T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |
| . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
386 | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | |
. | 430 | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . |
  |
  |   |
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | G | K | R | L | V | T | Y | Q | T | D | A | N | G | Q | P | V | N | Q | I | L | V | E | A | A | T | D | I | A | K | E | L | Y | L | G | A | V | V | D | R | S | S | R | R | V | V | F |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|
|
|   |   |
|   |   |   |   |
|
|
|
|
|
|   |   |
|   |   |   |
|   |   |
|
|
Alig confidence |   |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|
|
|
|   |
|   |
|   |
|   |   |   |   |   |
|   |   |
|   |   |
|   |   |
|   |   |
Template Sequence |   |
Q | S | E | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | G | S | P | I | F | L | M | K | L | A | Q | H | A | R | H | L | E | V | Q | I | L | A | D | Q | Y | G | N | A | V | S | L |
Template Known Secondary structure |   |
 |  |  | S | . | . | . | . | . | . | . | . | . | . | . | T | T |
|
|  |  |  |  |  |
|
| S | S |
|  |  |  |  |  |  |  |  |  |
| S | S | S |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
481 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|