Job Description P0A836 Confidence 23.98% Date Thu Jan 5 11:06:47 GMT 2012 Rank 298 Aligned Residues 87 % Identity 10% Template c3f43A_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative anti-sigma factor antagonist tm1081; PDBTitle: crystal structure of a putative anti-sigma factor antagonist (tm1081)2 from thermotoga maritima at 1.59 a resolution Resolution 1.59 Å

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		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.			.	.	370
Predicted Secondary structure																																																																													.	.
Query SS confidence																																																																													.	.
Query Sequence		A	T	K	E	R	V	T	E	A	F	K	I	I	L	S	D	D	K	V	K	A	V	L	V	N	I	F	G	G	I	V	R	C	D	L	I	A	D	G	I	I	G	A	V	A	E	V	G	V	N	V	P	V	V	V	R	L	E	G	N	N	A	E	L	G	A	K	K	L	A	D	S	G	L	N	.	.	I	I	A
Query Conservation																																																																													.	.
Alig confidence																										.																																								.											.	.
Template Conservation																										.																																								.
Template Sequence		E	N	A	H	L	F	K	K	W	V	F	D	E	F	L	N	K	G	Y	N	K	I	F	L	.	V	L	S	D	V	E	S	I	D	S	F	S	L	G	V	I	V	N	I	L	K	S	I	S	S	S	G	G	F	F	A	L	V	S	P	N	E	K	V	.	E	R	V	L	S	L	T	N	L	D	R	I	V	K	I
Template Known Secondary structure		T	T												T	G	G	G	T							.			T	T																							T													.							T	T	G	G	G	T	S
Template Predicted Secondary structure																										.																																								.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		371	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	G	L	T	D	A	A	Q	Q	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	D	T	I	S	E	A	X	E	E	V
Template Known Secondary structure			S	S
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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