Job Description P0A836 Confidence 98.90% Date Thu Jan 5 11:06:47 GMT 2012 Rank 24 Aligned Residues 128 % Identity 16% Template c3dmyA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein fdra; PDBTitle: crystal structure of a predicated acyl-coa synthetase from e.coli Resolution 2.07 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.																			.	.	.	.	.	290	.	.	.					.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.
Query Sequence		G	N	I	G	C	M	V	N	G	A	G	L	A	M	G	T	M	D	I	V	K	L	H	G	G	E	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	F	L	D	V	G	G	G	A	.	.	.	.	T	K	E	R	V	T	E	A	F	K	I	I	L	S	D	D	K	V	K	A	V
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.
Template Conservation
Template Sequence		G	F	I	C	G	L	Y	T	G	G	T	L	A	A	E	A	A	G	L	L	A	G	H	L	G	V	E	T	H	Q	H	G	X	X	L	D	A	D	S	H	Q	I	I	D	L	G	D	D	F	Y	T	V	G	R	P	H	P	X	I	D	P	T	L	R	N	Q	L	I	A	D	L	G	A	K	P	Q	V	R	V	L
Template Known Secondary structure									S																T	T					G	G	G						T	T						T	T	S					T	T	S			T	T	T												G	G	G		T	T
Template Predicted Secondary structure
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.							340	.	.	.	.	.	.	.	.	.	350	.	.	.						.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.															.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.															.	.	.	.	.
Query Sequence		L	V	N	I	F	G	G	I	V	R	C	D	L	I	A	D	G	I	I	G	A	V	A	E	V	.	.	.	.	.	.	G	V	N	V	P	V	V	V	R	L	E	G	N	N	.	.	.	.	.	A	E	L	G	A	K	K	L	A	D	S	G	L	N	I	I	A	A	K	G	L	T	D	A	A	Q	Q	V	V	A
Query Conservation																											.	.	.	.	.	.															.	.	.	.	.
Alig confidence																											.	.	.	.	.	.															.	.	.	.	.																				.	.
Template Conservation																																																																							.	.
Template Sequence		L	L	D	V	V	I	G	F	G	A	T	A	D	P	A	A	S	L	V	S	A	W	Q	K	A	C	A	A	R	L	D	N	Q	P	L	Y	A	I	A	T	V	T	G	T	E	R	D	P	Q	C	R	S	Q	Q	I	A	T	L	E	D	A	G	I	A	V	V	S	S	L	.	.	P	E	A	T	L	L	A	A	A
Template Known Secondary structure								S	T	T	S		S																T	S		T	T	S										S		T	T	S	T	T												T	T					S	S		.	.
Template Predicted Secondary structure																																																																							.	.
Template SS confidence
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.			.	.	.	.	.	.	.	490	.
		384	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	H
Template Known Secondary structure			T	S
Template Predicted Secondary structure
Template SS confidence
		492	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions