 |
Job Description | P0A836 | Confidence | 94.63% | Date | Thu Jan 5 11:06:47 GMT 2012 |
Rank | 95 | Aligned Residues | 59 |
% Identity | 34% | Template | c3bezC_ |
PDB info |
PDB header:hydrolase | Chain: C: PDB Molecule:protease 4; |
PDBTitle: crystal structure of escherichia coli signal peptide peptidase (sppa),2 semet crystals
|
Resolution | 2.76 Å |
|
 |
  |   |
290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | |
|
. | . | . | . | 320 | . | . | . | |
. | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  | . | . |  |  |
|
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | G | G | A | T | K | E | R | V | T | E | A | F | K | I | I | L | S | D | D | K | V | K | A | V | L | . |
. |
V | N | I | F | G | G | I | V | . |
R | C | D | L | I | A | D | G | I | I | G | A | V | A | E | V | G | V | N | V | P | V | V | V | R | L | E | G |
Query Conservation |   |
|
|   |
|   |   |
|   |   |   |   |
|
|   |
|   |
|   |
|   |   |
|   |   |
|
| . | . |
|   |
|   |
|
|
|   | . |   |   |   |   |
|
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |
|
|
|
|
|
|   |
|
|
|
|
|
|   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   | . | . | . |   |   |
|
|
|
|   |   |   |   |   |
Template Sequence |   |
Q | G | N | V | G | G | D | T | T | A | A | Q | I | R | D | A | R | L | D | P | K | V | K | A | I | V | L | R | V | N | S | P | G | G | S | V | T | A | S | E | V | I | R | A | E | L | A | A | A | R | A | . |
. |
. |
A | G | K | P | V | V | V | S | X | G | G |
Template Known Secondary structure |   |
T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |  |  |  |  |  |  |  |  |  |  |
|
| B |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | T | T |
|
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . |
|
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
344 | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | |
|
|
. | . | . | . | . | 400 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|