Return to main results Retrieve Phyre Job Id

Job DescriptionP0A836
Confidence97.92%DateThu Jan 5 11:06:47 GMT 2012
Rank72Aligned Residues122
% Identity16%Templatec2yv2A_
PDB info PDB header:ligaseChain: A: PDB Molecule:succinyl-coa synthetase alpha chain; PDBTitle: crystal structure of succinyl-coa synthetase alpha chain from2 aeropyrum pernix k1
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   257..260.........270.........280.........290... ......300.........310.........320.........330.....
Predicted Secondary structure 














.












Query SS confidence 




































.









































Query Sequence  GNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGA. TKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGA
Query Conservation 
 

   




 
 
 
 
   

  

  



 
.  
    

 
 
 
  
  


 
 


     

  

 
Alig confidence 




































.































....





Template Conservation 
 







     
       
 
 
  

 

 
  

   
 
  
  
  
  
 

 
      ....      
Template Sequence  GGVAVVSRSGTLTYEISYMLTRQGIGQSTVIGIGGDPIVGLSFTEALKLFQEDPQTEALVLIGEIGGDME. . . . ERAAEM
Template Known Secondary structure  S
TT



SSSS
SS
T
TT
S
SSSS....
Template Predicted Secondary structure 



























....
Template SS confidence 















































































   152.......160.........170.........180.........190.........200.........210.........220. ......
 
   336...340.........350. ........360...... ...370.........380..
Predicted Secondary structure 






..




.



Query SS confidence 















. .














.















Query Sequence  VAEVGVNVPVVVRLEG. . NNAELGAKKLADSGL. NIIAAKGLTDAAQQVV
Query Conservation          


  
 
..    
    
   

.
         

   
Alig confidence 















..














.















Template Conservation   
     



  
 



      
     


      

 
   
 
Template Sequence  IKKGEFTKPVIAYIAGRTGTYEGKVKALREAGVEVAETPFEVPELVRKAL
Template Known Secondary structure  TTS

S
S



STTT
SSGGG
Template Predicted Secondary structure 
















Template SS confidence 

















































   228.230.........240.........250.........260.........270.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions