Return to main results Retrieve Phyre Job Id

Job DescriptionP0A836
Confidence44.59%DateThu Jan 5 11:06:47 GMT 2012
Rank189Aligned Residues107
% Identity15%Templatec2rjoA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:twin-arginine translocation pathway signal protein; PDBTitle: crystal structure of twin-arginine translocation pathway signal2 protein from burkholderia phytofirmans
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   271........280.........290.........300....... ..310.........320.........330.........340.........
Predicted Secondary structure 











.
















Query SS confidence 




































.









































Query Sequence  GTMDIVKLHGGEPANFLDVGGGATKERVTEAFKIILS. DDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRL
Query Conservation   
 
 
   

  

  



 
  
    

 
 
 .
  
  


 
 


     

  

 
        


  
Alig confidence 




































.








.......























.
Template Conservation 
    
                                      
  .......  
  
 
   

   
    
 
. 
Template Sequence  GLDAALKKFPGIQLLDFQVADWNSQKAFPIXQAWXTRFNSKIKGVWA. . . . . . . ANDDXALGAIEALRAEGLAGQIPV. T
Template Known Secondary structure  T
TT
TT
GGG.......SSTT
BTTB
.
Template Predicted Secondary structure 
















.......








.
Template SS confidence 















































































   192.......200.........210.........220.........230........ .240.........250.........260.. .
 
   350.........360.........370.........380.....
Predicted Secondary structure 










Query SS confidence 



































Query Sequence  EGNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAV
Query Conservation   
    
    
   


         

   
   
Alig confidence 



































Template Conservation 
 
        
  
    

   
   
  

   
Template Sequence  GXDGTQPGLVAIKSGELVASVDWDPFWLGGIGLSXG
Template Known Secondary structure 
SB

TTS

B

Template Predicted Secondary structure 









Template SS confidence 



































   264.....270.........280.........290.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions