Job Description P0A836 Confidence 63.10% Date Thu Jan 5 11:06:47 GMT 2012 Rank 141 Aligned Residues 116 % Identity 14% Template c2q4dB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:lysine decarboxylase-like protein at5g11950; PDBTitle: ensemble refinement of the crystal structure of a lysine2 decarboxylase-like protein from arabidopsis thaliana gene at5g11950 Resolution 2.15 Å

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		261	.	.	.	.	.	.	.		.	270			.	.	.	.	.	.	.	.	.	280	.	.															.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure										.			.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.			.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	M	V	N	G	A	G	L	.	A	M	.	.	G	T	M	D	I	V	K	L	H	G	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	N	F	L	D	V	G	G	G	A	T	K	E	R	V	T	E	A	F	K	I	I	L	S	D	D	K	V	K	A	V	L	V	N	I	F	G	G	I	V
Query Conservation										.			.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.			.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.
Template Sequence		D	L	V	Y	G	G	G	S	V	G	L	X	G	L	I	S	R	R	V	Y	E	G	G	L	H	V	L	G	I	I	P	K	A	L	X	P	I	E	I	S	G	E	T	V	G	D	V	R	V	V	A	D	X	H	E	R	K	A	A	X	A	Q	E	A	E	A	.	.	.	.	.	F	I	A	L	P	G	G	Y	G
Template Known Secondary structure									S	S														S	S							B	G	G	G							S	S			S					B	S	S											T		S	B	.	.	.	.	.					S		S
Template Predicted Secondary structure																																																																				.	.	.	.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.						.	110	.	.	.	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.				.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.							.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																														.	.	.																	.	.	.	.	.	.
Query SS confidence																														.	.	.																	.	.	.	.	.	.
Query Sequence		R	C	D	L	I	A	D	G	I	I	G	A	V	A	E	V	G	V	N	V	P	V	V	V	R	L	E	G	.	.	.	N	N	A	E	L	G	A	K	K	L	A	D	S	G	L	N	.	.	.	.	.	.	I	I	A	A	K	G	L	T	D	A	A	Q	Q	V
Query Conservation																														.	.	.																	.	.	.	.	.	.
Alig confidence																														.	.	.																	.	.	.	.	.	.
Template Conservation
Template Sequence		T	X	E	E	L	L	E	X	I	T	W	S	Q	L	G	I	H	K	K	T	V	G	L	L	N	V	D	G	Y	Y	N	N	L	L	A	L	F	D	T	G	V	E	E	G	F	I	K	P	G	A	R	N	I	V	V	S	A	P	T	A	K	E	L	X	E	K	X
Template Known Secondary structure																T	S										G	G	G	T	T														T	S	S		T	T	G	G	G	G					S	S
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions