Job Description P0A836 Confidence 97.50% Date Thu Jan 5 11:06:47 GMT 2012 Rank 85 Aligned Residues 121 % Identity 21% Template c2nu8D_ PDB info PDB header:ligase Chain: D: PDB Molecule:succinyl-coa ligase [adp-forming] subunit alpha; PDBTitle: c123at mutant of e. coli succinyl-coa synthetase Resolution 2.15 Å

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		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		G	N	I	G	C	M	V	N	G	A	G	L	A	M	G	T	M	D	I	V	K	L	H	G	G	E	P	A	N	F	L	D	V	G	G	G	A	.	T	K	E	R	V	T	E	A	F	K	I	I	L	S	D	D	K	V	K	A	V	L	V	N	I	F	G	G	I	V	R	C	D	L	I	A	D	G	I	I	G	A
Query Conservation																																							.
Alig confidence																																							.																													.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.
Template Sequence		G	K	V	G	I	V	S	R	S	G	T	L	T	Y	E	A	V	K	Q	T	T	D	Y	G	F	G	Q	S	T	C	V	G	I	G	G	D	P	I	P	G	S	N	F	I	D	I	L	E	M	F	E	K	D	P	Q	T	E	A	I	V	M	I	G	E	I	G	.	.	.	.	.	G	S	A	E	E	E	A	A	A
Template Known Secondary structure									S															T	T											S	S	S	S		S	S											T		T	T										S	S	.	.	.	.	.	S	S
Template Predicted Secondary structure																																																																				.	.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210						.	.	.	.	.	.	.	.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.																					.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.		.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query Sequence		V	A	E	V	G	V	N	V	P	V	V	V	R	L	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	N	A	E	L	G	A	K	K	L	A	D	S	G	L	N	.	I	I	A	A	K	G	L	T	D	A	A	Q	Q	V	V
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation
Template Sequence		Y	I	K	E	H	V	T	K	P	V	V	G	Y	I	A	G	V	T	A	P	K	G	K	R	M	G	H	A	G	A	I	I	A	G	G	K	G	T	A	D	E	K	F	A	A	L	E	A	A	G	V	K	T	V	R	S	L	A	D	I	G	E	A	L	K	T	V	L
Template Known Secondary structure									S									T	T			T	T				S	S	T	T					T	T														T	T					S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions