 |
Job Description | P0A836 | Confidence | 57.65% | Date | Thu Jan 5 11:06:47 GMT 2012 |
Rank | 152 | Aligned Residues | 52 |
% Identity | 21% | Template | c2kboA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:dna dc->du-editing enzyme apobec-3g; |
PDBTitle: structure, interaction, and real-time monitoring of the2 enzymatic reaction of wild type apobec3g
|
Resolution | UNK |
|
  |   |
316 | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  | . | . | . | . | . |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | N | I | F | G | G | I | V | R | C | D | L | I | A | D | G | I | I | G | A | V | A | E | V | G | V | N | V | P | V | V | V | R | . |
. |
. |
. |
. |
L | E | G | N | N | A | E | L | G | A | K | K | L | A | D | S | G | L | N | I |
Query Conservation |   |
|   |
|   |
|
|
|   |   |   |   |   |
|
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |
|
|
|   |   | . | . | . | . | . |
|   |
|   |   |   |   |
|   |   |   |   |
|   |   |   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|   |   |
|
|   |   |
|   |   |
|
|   |   |   |   | . |   |
|   |
|   |
|
|   |
|
|
|
|   |   |   |   |   |   |
|   |
|
|
|   |
|   |   |
|
|   |   |
|
Template Sequence |   |
V | T | C | F | T | S | W | S | P | C | F | S | C | A | Q | E | M | A | K | F | I | S | K | N | K | . |
H | V | S | L | C | I | F | T | A | R | I | Y | D | D | Q | G | R | C | Q | E | G | L | R | T | L | A | E | A | G | A | K | I |
Template Known Secondary structure |   |
 |  |  |  |
| S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | . | T |  |  |  |  |  |  |  |
|
|
|
|
| S |
| S | G | G | G |  |  |  |  |  |  |  |  |  | T |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | |
. | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|