 |
Job Description | P0A836 | Confidence | 33.21% | Date | Thu Jan 5 11:06:47 GMT 2012 |
Rank | 245 | Aligned Residues | 107 |
% Identity | 17% | Template | c2i2xD_ |
PDB info |
PDB header:transferase | Chain: D: PDB Molecule:methyltransferase 1; |
PDBTitle: crystal structure of methanol:cobalamin methyltransferase complex2 mtabc from methanosarcina barkeri
|
Resolution | 2.50 Å |
|
 |
  |   |
267 | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | L | A | M | G | T | M | D | I | V | K | L | H | G | G | E | P | A | N | F | L | D | V | G | G | G | A | T | K | E | R | V | T | E | A | F | K | I | I | L | S | D | D | K | V | K | A | V | L | V | N | I | F | G | G | I | V | R | C | D | L | I | A | D | G | I | I | G | A | V | A | E | V | G | V | N | V | P | V | V |
Query Conservation |   |
|
|   |
|   |
|   |
|   |
|   |   |   |
|
|   |   |
|
|   |   |
|
|
|
|   |
|   |   |
|   |   |   |   |
|
|   |
|   |
|   |
|   |   |
|   |   |
|
|
|   |
|   |
|
|
|   |   |   |   |   |
|
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   | . |   |   |
|   |   |   |
|   |   |
|   | . | . | . |   |
|
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   | . | . | . | . |   |   |
|   |
|
|
| . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |
|   |
Template Sequence |   |
G | K | N | I | V | T | . |
A | L | L | R | A | N | G | Y | N | V | V | . |
. |
. |
D | L | G | R | D | V | P | A | E | E | V | L | A | A | V | Q | K | E | . |
. |
. |
. |
K | P | I | M | L | T | G | . |
. |
T | A | L | M | T | T | T | M | Y | A | F | K | E | V | N | D | M | L | L | E | N | G | I | K | I | P | F | A |
Template Known Secondary structure |   |
 |  |  |  |  |  | . |  |  |  |  |  |  | T |
|  |  |  | . | . | . |  |  |  |  |  |  |
| T |  |  |  |  |  |  |  |  |  |  | . | . | . | . |
|
| S |  |  |  |  | . | . |  |
|
| S | T | T | T | T | T |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|
|
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  | . |  |  |  |  |  |
|
|
|  |  |  | . | . | . |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |
|
|
|  |  |  |  | . | . |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
139 | 140 | . | . | . | . | |
. | . | . | . | . | 150 | . | . | . | . | . | |
|
|
. | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | |
|
|
|
. | . | . | . | . | . | 180 | |
|
. | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . |
  |
  |   |
347 | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | R | L | E | G | N | N | A | E | L | G | A | K | K | L | A | D | S | G | L | N | I | I | A | A | K | G | L | T | D | A | A | Q | Q | V | V | A | A | V | E | G | K |
Query Conservation |   |
  |   |
|   |
|   |   |   |   |
|   |   |   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
| . | . |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
| . | . |
|
|   |   |   |   |   | . | . |   |   |   |   |   |   |
|
|
|   |   | . |   |   |
|
|   |   |
|
|   |   |
|   |   |
|   |   |   |   |
Template Sequence |   |
C | . |
. |
G | G | G | A | V | N | Q | . |
. |
D | F | V | S | Q | F | A | L | G | V | Y | . |
G | E | E | A | A | D | A | P | K | I | A | D | A | I | I | A | G | T |
Template Known Secondary structure |   |
 | . | . |  |
| T | T |
|
| T | . | . | T | T | G | G | G | S | S | S |  |  |  | . |
| S | S | T | T |  |  |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
 | . | . |  |
|
|
|
|
|  | . | . |  |  |  |  |  |  |
|
|
|  |  | . |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
209 | |
|
210 | . | . | . | . | . | . | |
|
. | . | . | 220 | . | . | . | . | . | . | . | |
. | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|