Job Description P0A836 Confidence 100.00% Date Thu Jan 5 11:06:47 GMT 2012 Rank 6 Aligned Residues 210 % Identity 20% Template c1wr2A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ph1789; PDBTitle: crystal structure of ph1788 from pyrococcus horikoshii ot3 Resolution 2.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																		.														.
Query SS confidence																																																		.														.
Query Sequence		L	H	E	Y	Q	A	K	Q	L	F	A	R	Y	G	L	P	A	P	V	G	Y	A	C	T	T	P	R	E	A	E	E	A	A	S	K	I	G	A	G	P	W	V	V	K	C	Q	V	H	.	A	G	G	R	G	K	A	G	G	V	K	V	V	.	N	S	K	E	D	I	R	A	F	A	E	N	W	L	G	K	R
Query Conservation																																																		.														.
Alig confidence																																							.											.														.
Template Conservation																																							.
Template Sequence		M	V	E	Y	E	A	K	Q	V	L	K	A	Y	G	L	P	V	P	E	E	K	L	A	K	T	L	D	E	A	L	E	Y	A	K	E	I	G	.	Y	P	V	V	L	K	L	M	S	P	Q	I	L	H	K	S	D	A	K	V	V	M	L	N	I	K	N	E	E	E	L	K	K	K	W	E	E	I	H	E	N	A
Template Known Secondary structure													T	T	T										S	S													.	S	S								T	T								T								S
Template Predicted Secondary structure																																							.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	T	Y	Q	T	D	A	N	G	Q	P	V	N	Q	I	L	V	E	A	A	T	D	I	A	K	E	L	Y	L	G	A	V	V	D	R	S	S	R	R	V	V	F	M	A	S	T	E	G	G	V	E	I	E	K	V	A	E	E	T	P	H	L	I	H	K	V	A	L	D	P	L	T	G	P	M	P	Y	Q	G
Query Conservation
Alig confidence		.	.	.	.																																										.	.
Template Conservation		.	.	.	.																																										.	.
Template Sequence		.	.	.	.	K	K	Y	R	P	D	A	E	I	L	G	V	L	V	A	P	M	L	K	P	G	R	E	V	I	I	G	V	T	E	D	P	Q	F	G	H	A	I	M	F	G	.	.	L	G	G	I	F	V	E	I	L	K	D	V	T	F	R	L	V	P	I	T	E	K	D	A	R	K	M	I	Q	E	I	K	A
Template Known Secondary structure		.	.	.	.					T	T																										T	T	T								.	.			S	T	T												S	S												T	S	T	T
Template Predicted Secondary structure		.	.	.	.																																										.	.
Template SS confidence
						99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																																		.	.																	.
Query SS confidence																																		.	.																	.
Query Sequence		R	E	L	A	F	K	L	G	L	E	G	K	L	V	Q	Q	F	T	K	I	F	M	G	L	A	T	I	F	L	E	R	D	.	.	L	A	L	I	E	I	N	P	L	V	I	T	K	Q	G	D	.	L	I	C	L	D	G	K	L	G	A	D	G
Query Conservation																																		.	.																	.
Alig confidence								.																										.	.																	.
Template Conservation								.
Template Sequence		Y	P	I	L	A	G	.	A	E	E	P	A	D	I	D	A	I	V	D	M	L	L	K	V	S	K	L	V	D	D	L	K	D	Y	I	K	E	M	D	L	N	P	V	F	V	Y	N	K	G	E	G	A	V	I	V	D	S	R	I	I	L	K	P
Template Known Secondary structure								.					B																			T	T	T	T													B	T	T	S
Template Predicted Secondary structure								.
Template SS confidence
		173	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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