|   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | Q | A | K | Q | L | F | A | R | Y | G | L | P | A | P | V | G | Y | A | C | T | T | P | R | E | A | E | E | A | A | S | K | I | G | A | G | P | W | V | V | K | C | Q | V | H | A | G | G | R | G | K | A | G | G | V | K | V | V | N | S | K | E | D | I | R | A | F | A | E | N | W | L | G | K | R | L | V | T | Y | Q |
Query Conservation |   |
  |
|
|
|   |
|
|   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |
|
|
|   |   |   |
|   |   |
|
|   |   |
|
|
|
|
|   |
|
|   |   |
|   |
|   |
|   |
|
|
|   |
|   |   |   |   |
|
|   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
Template Conservation |   |
  |   |   |
|   |   |
|   |   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
| . |   |
|   |
|
|
|
|   |   |
|   |
|
|   | . | . | . | . |
|
|   |   |
|   |   |   |   |
|
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |
Template Sequence |   |
V | Y | A | K | R | F | X | K | K | Y | G | I | R | T | A | R | F | E | V | A | E | T | P | E | E | L | R | E | K | I | K | K | F | S | . |
P | P | Y | V | I | K | A | D | G | L | A | R | G | K | . |
. |
. |
. |
G | V | L | I | L | D | S | K | E | E | T | I | E | K | G | S | K | L | I | . |
. |
. |
. |
. |
. |
. |
I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
|
|
|
|
|  |  |  |  | S | S |  |  |  |  |  |  |  |  | T | T | S |
| . | S | S |  |  |  |  |  | S | S |
|
| S | S |
| . | . | . | . |
|  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
96 | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | |
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | |
|
|
|
. | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | |
|
|
|
|
|
|
. |
  |
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | D | A | N | G | Q | P | V | N | Q | I | L | V | E | A | A | T | D | I | A | K | E | L | Y | L | G | A | V | V | D | R | S |
Query Conservation |   |
  |   |   |   |
|   |   |
|   |   |
|
|
|
|   |   |
|   |   |   |   |
|
|
|
|
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   | . |
|   |
|   |
|
|   |   |   |   |   |   |   |
Template Sequence |   |
G | E | L | I | K | G | V | K | G | P | V | V | I | D | E | F | L | A | . |
G | N | E | L | S | A | X | A | V | V | N | G | R |
Template Known Secondary structure |   |
T | S | S | S | T | T |
|
| S |
|  |  |  |  |  |
|
|
| . | S |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
| . |
|  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
164 | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | |
. | . | . | . | . | . | . | . | 190 | . | . | . | . |
  |