Return to main results Retrieve Phyre Job Id

Job DescriptionP0A836
Confidence38.79%DateThu Jan 5 11:06:47 GMT 2012
Rank219Aligned Residues97
% Identity12%Templatec1gqqA_
PDB info PDB header:cell wall biosynthesisChain: A: PDB Molecule:udp-n-acetylmuramate-l-alanine ligase; PDBTitle: murc - crystal structure of the apo-enzyme from haemophilus2 influenzae
Resolution3.1 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   286...290.........300........ .310.........320.........330.........340......... 350....
Predicted Secondary structure 





.















..........



Query SS confidence 






















.








































. . . . . . . . . .




Query Sequence  FLDVGGGATKERVTEAFKIILSD. DKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRL. . . . . . . . . . EGNNA
Query Conservation    



 
  
    

 
 
 
.  
  


 
 


     

  

 
        


  
.......... 
   
Alig confidence 






















.































....




..........




Template Conservation   
  
 



 
    
  
       
 
 
               
       
.... 


            
   
Template Sequence  RLVDDYGHHPTEVGVTIKAAREGWGDKRIVMIFQPHRYSRTRDLFDDFVQVLSQVD. . . . ALIMLDVYAAGEAPIVGADS
Template Known Secondary structure 


SSSS

B
TTSS....


B
TT



TT
S
Template Predicted Secondary structure 















....













Template SS confidence 















































































   341........350.........360.........370.........380.........390...... ...400.........410......
 
   355....360..... ....370.........380......
Predicted Secondary structure 

.




Query SS confidence 










.




















Query Sequence  ELGAKKLADSG. LNIIAAKGLTDAAQQVVAAVE
Query Conservation   
    
   
.

         

   
    
Alig confidence 










.




















Template Conservation    
                    

      
 
Template Sequence  KSLCRSIRNLGKVDPILVSDTSQLGDVLDQIIQ
Template Known Secondary structure  TS





GGG

Template Predicted Secondary structure 








Template SS confidence 
































   417..420.........430.........440.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions