Job Description P0A836 Confidence 100.00% Date Thu Jan 5 11:06:47 GMT 2012 Rank 2 Aligned Residues 384 % Identity 45% Template c1eucB_ PDB info PDB header:ligase Chain: B: PDB Molecule:succinyl-coa synthetase, beta chain; PDBTitle: crystal structure of dephosphorylated pig heart, gtp-2 specific succinyl-coa synthetase Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.								.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.
Query Sequence		M	N	L	H	E	Y	Q	A	K	Q	L	F	A	R	Y	G	L	P	A	P	V	G	Y	A	C	T	T	P	R	E	A	E	E	A	A	S	K	I	G	A	G	P	W	V	V	K	C	Q	V	H	A	G	G	R	G	K	.	.	.	.	.	.	.	A	G	G	V	K	V	V	N	S	K	E	D	I	R	A	F	A
Query Conservation																																																										.	.	.	.	.	.	.
Alig confidence																																																										.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	N	L	Q	E	Y	Q	S	K	K	L	M	S	D	N	G	V	K	V	Q	R	F	F	V	A	D	T	A	N	E	A	L	E	A	A	K	R	L	N	A	K	E	I	V	L	K	A	Q	I	L	A	G	G	R	G	K	G	V	F	S	S	G	L	K	G	G	V	H	L	T	K	D	P	E	V	V	G	Q	L	A
Template Known Secondary structure															T	T	T										S	S												T		S	S								S	S	S			T	T				T	T	S		B		S					S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	W	L	G	K	R	L	V	T	Y	Q	T	D	A	N	G	Q	P	V	N	Q	I	L	V	E	A	A	T	D	I	A	K	E	L	Y	L	G	A	V	V	D	R	S	S	R	R	V	V	F	M	A	S	T	E	G	G	V	E	I	E	K	V	A	E	E	T	P	H	L	I	H	K	V	A	L	D	P	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Q	M	I	G	Y	N	L	A	T	K	Q	T	P	K	E	G	V	K	V	N	K	V	M	V	A	E	A	L	D	I	S	R	E	T	Y	L	A	I	L	M	D	R	S	C	N	G	P	V	L	V	G	S	P	Q	G	G	V	D	I	E	E	V	A	A	S	N	P	E	L	I	F	K	E	Q	I	D	I	I	E
Template Known Secondary structure			T	T	T	T	S					T	T	S		T	T																S											G	G	G	T								S	S		S	S										G	G	G							B	T	T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	M	P	Y	Q	G	R	E	L	A	F	K	L	G	L	E	G	K	L	V	Q	Q	F	T	K	I	F	M	G	L	A	T	I	F	L	E	R	D	L	A	L	I	E	I	N	P	L	V	I	T	K	Q	G	D	L	I	C	L	D	G	K	L	G	A	D	G	N	A	L	F	R	Q	P	D	L	R	E	M	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	K	D	S	Q	A	Q	R	M	A	E	N	L	G	F	L	G	P	L	Q	N	Q	A	A	D	Q	I	K	K	L	Y	N	L	F	L	K	I	D	A	T	Q	V	E	V	N	P	F	G	E	T	P	E	G	Q	V	V	C	F	D	A	K	I	N	F	D	D	N	A	E	F	R	Q	K	D	I	F	A	M	D
Template Known Secondary structure		B													T	T			T																				T	T													T	T	T													G	G	G	G	G	G							T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	S	Q	E	D	P	R	E	A	Q	A	A	Q	W	E	L	N	Y	V	A	L	D	G	N	I	G	C	M	V	N	G	A	G	L	A	M	G	T	M	D	I	V	K	L	H	G	G	E	P	A	N	F	L	D	V	G	G	G	A	T	K	E	R	V	T	E	A	F	K	I	I	L	S	D	D	K	V	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	K	S	E	N	E	P	I	E	N	E	A	A	K	Y	D	L	K	Y	I	G	L	D	G	N	I	A	C	F	V	N	G	A	G	L	A	M	A	T	C	D	I	I	F	L	N	G	G	K	P	A	N	F	L	D	L	G	G	G	V	K	E	S	Q	V	Y	Q	A	F	K	L	L	T	A	D	P	K	V	E	A
Template Known Secondary structure				T	T	S										T	T							S		S						S	S														T	T			B	S							S	S													T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	V	N	I	F	G	G	I	V	R	C	D	L	I	A	D	G	I	I	G	A	V	A	E	V	G	V	N	V	P	V	V	V	R	L	E	G	N	N	A	E	L	G	A	K	K	L	A	D	S	G	L	N	I	I	A	A	K	G	L	T	D	A	A	Q	Q	V	V	A	A	V
Query Conservation
Alig confidence															.
Template Conservation															.
Template Sequence		I	L	V	N	I	F	G	G	I	V	N	A	I	.	I	A	N	G	I	T	K	A	C	R	E	L	E	L	K	V	P	L	V	V	R	L	E	G	T	N	V	H	E	A	Q	N	I	L	T	N	S	G	L	P	I	T	S	A	V	D	L	E	D	A	A	K	K	A	V	A	S	V
Template Known Secondary structure									S	S					.													T			S								S	T	T										T	T		S	S					S	S											T
Template Predicted Secondary structure															.
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions