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Job Description | P0A836 | Confidence | 68.47% | Date | Thu Jan 5 11:06:47 GMT 2012 |
Rank | 127 | Aligned Residues | 103 |
% Identity | 20% | Template | c1e8cB_ |
PDB info |
PDB header:ligase | Chain: B: PDB Molecule:udp-n-acetylmuramoylalanyl-d-glutamate--2,6- |
PDBTitle: structure of mure the udp-n-acetylmuramyl tripeptide2 synthetase from e. coli
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Resolution | 2.00 Å |
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280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | |
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Predicted Secondary structure |   |
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Query Sequence |   |
G | G | E | P | A | N | F | L | D | V | G | G | G | A | T | K | E | R | V | T | E | A | F | K | I | I | L | S | D | D | K | V | K | A | V | L | V | N | I | F | G | G | I | V | R | C | D | L | I | A | D | G | I | I | G | A | V | A | E | V | G | V | N | V | P | V | V | V | R | L | E | . |
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G | N | N | A | E | L | G |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
P | G | K | P | T | V | V | V | D | . |
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Y | A | H | T | P | D | A | L | E | K | A | L | Q | A | A | R | L | H | C | A | G | K | L | W | C | V | . |
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F | G | C | G | G | D | R | D | K | G | K | R | P | L | X | G | A | I | A | E | E | F | A | D | V | A | V | V | T | D | D | N | P | R | T | E | E | P | R | A | I |
Template Known Secondary structure |   |
T | T | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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348 | . | 350 | . | . | . | . | . | . | |
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. | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | |
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. | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . |
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358 | . | 360 | . | . | . | . | . | . | . | |
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. | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
A | K | K | L | A | D | S | G | L | N | . |
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I | I | A | A | K | G | L | T | D | A | A | Q | Q | V | V | A | A | V | E |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
I | N | D | I | L | A | G | X | L | D | A | G | H | A | K | V | X | E | G | R | A | E | A | V | T | C | A | V | X | Q | A | K |
Template Known Secondary structure |   |
 |  |  |  |  | T | T | S | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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424 | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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