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Job DescriptionP02931
Confidence100.00%DateThu Jan 5 10:57:44 GMT 2012
Rank7Aligned Residues289
% Identity15%Templated2pora_
SCOP infoTransmembrane beta-barrels Porins Porin
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60.........70.........80.........90.........100.........110.
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Query Sequence  KVDLYGKAVGLHYFSKGNGENSYGGNGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNKTRLAFAGLK
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Template Sequence  EVKLSGDARMGVMYNGDD. . . . . . . WNFSSRSRVLFTMSGTTDSGLEFGASFKAHESVGAETG. . . . . . . . . EDGTVFLS
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GGGTTT.........SSS
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   1........10........ .20.........30.........40.........50...... ...60....
 
   112.......120.........130.........140....... ..150.........160.........170.........180....
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Query Sequence  YADVGSFDYGRNYGVVYDALGYTDMLPEFGGDTAYS. . . . . . . DDFFVGRVGGVATYRNSNFFGLVDGLNFAVQYLGKNE
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Template Sequence  . GAFGKIEMGDALGASEALFGDLYEVGYTDLDDRGGNDIPYLTGDERLTAEDNPVLLYTYSA. . . . GAFSVAASMSDGKV
Template Known Secondary structure  .TTS
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   65....70.........80.........90.........100.........110.........120..... ....130.........
 
   185....190.........200.........210.........220.........230.........240.........250........ .
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Query Sequence  RDTARRSNGDGVGGSISYEYEGFGIVGAYGAADRTNLQEAQPLGNGKKAEQWATGLKYDANNIYLAANYGETRN. . . . . A
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Template Sequence  GETSE. DDAQEMAVAAAYTFGNYTVGLGYEKIDSPD. . . . . . TALMADMEQLELAAIAKFGATNVKAYYADGELDRDFAR
Template Known Secondary structure  TTSS
.B

TT
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   140.... .....150.........160.........170.... .....180.........190.........200.........210..
 
   260.........270.........280.........290.........300.........310.........320.........330.........
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Query Sequence  TPITNKFTNTSGFANKTQDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVDYIINQ
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Template Sequence  AVFDLTPVAAAATAVDHKAYGLSVDSTFGA. TTVGGYVQVLDID. . . . . . TIDDVTYYGLGASYDLGGGASIVGGIADND
Template Known Secondary structure  TT



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   213......220.........230.........240.. .......250..... ....260.........270.........280.....
 
   340.........350.........360..
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Query Sequence  IDSDNKLGVGSDDTVAVGIVYQF
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Template Sequence  LP. . . . . . . NSDMVADLGVKFKF
Template Known Secondary structure  SS.......S



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   286. ..290.........300.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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