Job Description P02931 Confidence 96.65% Date Thu Jan 5 10:57:44 GMT 2012 Rank 31 Aligned Residues 322 % Identity 14% Template d2mpra_ SCOP info Transmembrane beta-barrels Porins Maltoporin-like Resolution 2.40

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.												60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	L	Y	G	K	A	V	G	L	H	Y	F	S	K	G	N	G	E	N	S	Y	G	G	N	G	D	.	.	.	.	.	.	.	.	.	.	.	M	T	Y	A	R	L	G	F	K	G	E	T	Q	I	N	S	D	L	T	G	Y	G	Q	W	E	Y	N	F	Q	G	N	N	S	E	G	A	D	A	Q	T	G	N
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.																																				.
Template Conservation																																																																											.
Template Sequence		V	D	F	H	G	Y	A	R	S	G	I	G	W	T	G	S	G	G	E	Q	Q	C	F	Q	A	T	G	A	Q	S	K	Y	R	L	G	N	E	C	E	T	Y	A	E	L	K	L	G	Q	E	V	W	K	E	G	D	K	S	F	Y	F	D	T	N	V	A	Y	S	V	N	Q	Q	N	D	.	W	E	S	T	D	P
Template Known Secondary structure																T	T	S	S	B							T	T		S					T	T				S															T	T																S	S	S	.
Template Predicted Secondary structure																																																																											.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.
		102	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.
Query SS confidence										.	.	.	.
Query Sequence		K	T	R	L	A	F	A	G	.	.	.	.	L	K	Y	A	D	V	G	S	F	D	Y	G	R	N	Y	G	V	V	Y	D	A	L	G	Y	T	D	M	L	P	E	F	G	G	D	T	A	Y	S	D	D	F	F	V	G	R	V	G	G	V	A	T	Y	R	N	S	N	F	F	G	L	V	D	G	L	N	F	A	V
Query Conservation										.	.	.	.
Alig confidence										.	.	.	.																																																								.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.
Template Sequence		A	F	R	E	A	N	V	Q	G	K	N	L	I	E	W	L	P	G	S	T	I	W	A	G	K	R	F	Y	Q	R	H	D	V	H	M	I	D	F	Y	Y	W	D	I	S	G	P	G	A	G	I	E	N	I	D	L	G	F	G	K	L	S	L	A	A	T	R	S	.	.	.	.	.	.	T	E	A	G	G	S	Y
Template Known Secondary structure												S			T	T	S	T	T											S					G	G	G	T																			S	S	S										.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.							.	.	.	150	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.					.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.
Predicted Secondary structure																										.	.	.	.																																															.
Query SS confidence																										.	.	.	.																																															.
Query Sequence		Q	Y	L	G	K	N	E	R	D	T	A	R	R	S	N	G	D	G	V	G	G	S	I	S	.	.	.	.	Y	E	Y	E	G	F	G	I	V	G	A	Y	G	A	A	D	R	T	N	L	Q	E	A	Q	P	L	G	N	G	K	K	A	E	Q	W	A	T	G	L	K	Y	D	A	N	N	I	.	Y	L	A	A	N
Query Conservation																										.	.	.	.																																															.
Alig confidence																										.	.	.	.																																															.
Template Conservation
Template Sequence		T	F	S	S	Q	N	I	Y	D	E	V	K	D	T	A	N	D	V	F	D	V	R	L	A	G	L	Q	T	N	P	D	G	V	L	E	L	G	V	D	Y	G	R	A	N	T	T	D	G	Y	K	L	A	D	G	A	S	K	D	G	W	M	F	T	A	E	H	T	Q	S	M	L	K	G	Y	N	K	F	V	V	Q
Template Known Secondary structure						T	T																								T	T																T	T		B			T	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.															.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	G	E	T	R	N	A	T	P	I	T	N	K	F	T	N	T	S	G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	K	T	Q	D	V	L	L	V	A	Q	Y	Q	F	D	F	G	L	R	P	S	I	A	Y	T	K	S	K	A	K	D	V	E	G	I	G	D	V	D	L	V	N	Y	F	E
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	A	T	D	A	M	T	T	Q	G	K	G	Q	A	R	G	S	D	G	S	S	S	F	T	E	K	I	N	Y	A	N	K	V	I	N	N	N	G	N	M	W	R	I	L	D	H	G	A	I	S	L	G	D	K	W	D	L	M	Y	V	G	M	Y	Q	N	I	D	W	D	N	N	L	G	T	E	W	W	T	V	G
Template Known Secondary structure					G	G	G	T	T	T		S	S				T	T	T	T																																	T	T	T															T	T	S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	A	T	Y	Y	F	N	K	N	M	S	T	Y	V	D	Y	I	I	N	Q	I	D	S	D	N	K	L	G	V	G	S	D	D	T	V	A	V	G	I	V	Y	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R	P	M	Y	K	W	T	P	I	M	S	T	L	L	E	V	G	Y	D	N	V	K	S	Q	Q	T	G	D	R	N	N	Q	Y	K	I	T	L	A	Q	Q	W	Q
Template Known Secondary structure										T	T															T	T	T
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions