Job Description P02931 Confidence 100.00% Date Thu Jan 5 10:57:44 GMT 2012 Rank 3 Aligned Residues 328 % Identity 62% Template d1osma_ SCOP info Transmembrane beta-barrels Porins Porin Resolution 3.20

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	I	Y	N	K	D	G	N	K	V	D	L	Y	G	K	A	V	G	L	H	Y	F	S	K	G	N	G	E	N	S	Y	G	G	N	G	D	M	T	Y	A	R	L	G	F	K	G	E	T	Q	I	N	S	D	L	T	G	Y	G	Q	W	E	Y	N	F	Q	G	N	N	S	E	G	A	D	A	Q	T	G	N	K
Query Conservation
Alig confidence																																		.	.	.	.	.																																		.	.
Template Conservation																																		.	.	.	.	.																																		.	.
Template Sequence		A	E	I	Y	N	K	D	G	N	K	L	D	L	Y	G	K	I	D	G	L	H	Y	F	S	D	D	K	D	V	D	G	D	.	.	.	.	.	Q	T	Y	M	R	L	G	V	K	G	E	T	Q	I	N	D	Q	L	T	G	Y	G	Q	W	E	Y	N	V	Q	A	N	N	T	.	.	E	S	S	S	D	Q	A	W
Template Known Secondary structure								T	T																	S	S	T	T	T				.	.	.	.	.															S	S	S														S	S		.	.	T	T
Template Predicted Secondary structure																																		.	.	.	.	.																																		.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.						.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	L	A	F	A	G	L	K	Y	A	D	V	G	S	F	D	Y	G	R	N	Y	G	V	V	Y	D	A	L	G	Y	T	D	M	L	P	E	F	G	G	D	T	A	Y	S	D	D	F	F	V	G	R	V	G	G	V	A	T	Y	R	N	S	N	F	F	G	L	V	D	G	L	N	F	A	V	Q	Y	L	G	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	R	L	A	F	A	G	L	K	F	G	D	A	G	S	F	D	Y	G	R	N	Y	G	V	V	Y	D	V	T	S	W	T	D	V	L	P	E	F	G	G	D	T	Y	G	S	D	N	F	L	Q	S	R	A	N	G	V	A	T	Y	R	N	S	D	F	F	G	L	V	D	G	L	N	F	A	L	Q	Y	Q	G	K
Template Known Secondary structure												T	T	S											T	T					G	G	G				S	S	S				S	S		T	T	S	T	T	S	S											S	S	G	G	G	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		183	.	.	.	.											.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.																				.
Query SS confidence							.	.	.	.	.	.	.	.	.	.																				.
Query Sequence		N	E	R	D	T	.	.	.	.	.	.	.	.	.	.	A	R	R	S	N	G	D	G	V	G	G	S	I	S	Y	E	Y	E	G	.	F	G	I	V	G	A	Y	G	A	A	D	R	T	N	L	Q	E	A	Q	P	L	G	N	G	K	K	A	E	Q	W	A	T	G	L	K	Y	D	A	N	N	I	Y	L	A	A
Query Conservation							.	.	.	.	.	.	.	.	.	.																				.
Alig confidence							.	.	.	.	.	.	.	.	.	.																				.
Template Conservation
Template Sequence		N	G	S	V	S	G	E	G	A	T	N	N	G	R	G	A	L	K	Q	N	G	D	G	F	G	T	S	V	T	Y	D	I	F	D	G	I	S	A	G	F	A	Y	A	N	S	K	R	T	D	D	Q	N	Q	L	L	L	G	E	G	D	H	A	E	T	Y	T	G	G	L	K	Y	D	A	N	N	I	Y	L	A	T
Template Known Secondary structure		B			S	S	T	T	T			T	T				G	G	G		B		S												T	T																		T	S	S	B				S														T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	G	E	T	R	N	A	T	P	I	T	N	K	F	T	N	T	S	G	F	A	N	K	T	Q	D	V	L	L	V	A	Q	Y	Q	F	D	F	G	L	R	P	S	I	A	Y	T	K	S	K	A	K	D	V	E	G	I	G	D	V	D	L	V	N	Y	F	E	V	G	A	T	Y	Y	F	N	K	N	M	S	T
Query Conservation
Alig confidence																		.	.	.	.	.
Template Conservation																		.	.	.	.	.
Template Sequence		Q	Y	T	Q	T	Y	N	A	T	R	A	G	S	L	G	F	.	.	.	.	.	A	N	K	A	Q	N	F	E	V	A	A	Q	Y	Q	F	D	F	G	L	R	P	S	V	A	Y	L	Q	S	K	G	K	D	L	N	G	Y	G	D	Q	D	I	L	K	Y	V	D	V	G	A	T	Y	Y	F	N	K	N	M	S	T
Template Known Secondary structure								S		S			T	T	T			.	.	.	.	.		S														T	T	S																S	S	S		S																	T	T
Template Predicted Secondary structure																		.	.	.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.						.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.				.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure														.	.	.
Query SS confidence														.	.	.
Query Sequence		Y	V	D	Y	I	I	N	Q	I	D	S	D	.	.	.	N	K	L	G	V	G	S	D	D	T	V	A	V	G	I	V	Y	Q	F
Query Conservation														.	.	.
Alig confidence														.	.	.
Template Conservation
Template Sequence		Y	V	D	Y	K	I	N	L	L	D	D	N	S	F	T	R	S	A	G	I	S	T	D	D	V	V	A	L	G	L	V	Y	Q	F
Template Known Secondary structure																				T				S
Template Predicted Secondary structure
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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