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Job DescriptionP02931
Confidence89.97%DateThu Jan 5 10:57:44 GMT 2012
Rank41Aligned Residues189
% Identity15%Templatec3sljA_
PDB info PDB header:protein transportChain: A: PDB Molecule:serine protease espp; PDBTitle: pre-cleavage structure of the autotransporter espp - n1023a mutant
Resolution2.48 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   169170.........180.........190.........200...... ...210.........220.........230. ........240......
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Query Sequence  LVDGLNFAVQYLGKNERDTARRSNGDGVGGSISYEYEG. FGIVGAYGAADRTNLQEAQPLGNGK. KAEQWATGLKYDANN
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Template Sequence  LFTGFTVTHTDSSASADVFSGKTKSVGAGLYASAMFDSGAYIDLIGKYVHHDNEYTATFAGLGTRDYSTHSWYAGAEAGY
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   1078.1080.........1090.........1100.........1110.........1120.........1130.........1140.........1150.......
 
   247 ..250.........260.... .....270.........280.........290 .........300.......
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Query Sequence  I. . . . . . . . . . . YLAANYGETRNATPITN. . . . . KFTNTSGFANKTQDVLLVAQYQFDFG. . . LRPSIAYTKSKAKDVEG
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Template Sequence  RYHVTEDAWIEPQAELVYGSVSGKQFAWKDQGMHLSMKDKDYNPLIGRTGVDVGKSFSGKDWKVTARAGLGYQFDLLANG
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TT

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   1158.1160.........1170.........1180.........1190.........1200.........1210.........1220.........1230.......
 
   308. 310.........320.........330.........340.........350.........360..
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Query Sequence  IG. . . . . . . . . . . . . DVDLVNYFEVGATYYFNKNMSTYVDYIINQIDSDNKLGVGSDDTVAVGIVYQF
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Template Sequence  ETVLRDASGEKRIKGEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYNVD. . . . . NAVNANFRYSF
Template Known Secondary structure  TT



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   1238.1240.........1250.........1260.........1270.........1280......... 1290.........1300
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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