Return to main results Retrieve Phyre Job Id

Job DescriptionP02931
Confidence2.36%DateThu Jan 5 10:57:44 GMT 2012
Rank76Aligned Residues168
% Identity11%Templatec1po3A_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:iron(iii) dicitrate transport protein feca PDBTitle: crystal structure of ferric citrate transporter feca in2 complex with ferric citrate
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   194.....200.........210.........220.........230.........240.... .....250.........260
Predicted Secondary structure 




















.............



Query SS confidence 


















































. . . . . . . . . . . . .















Query Sequence  DGVGGSISYEYEGFGIVGAYGAADRTNLQEAQPLGNGKKAEQWATGLKYDA. . . . . . . . . . . . . NNIYLAANYGETRNAT
Query Conservation                     
                               .............        
       
Alig confidence 


















































.............















Template Conservation       
              
       
                                                   
Template Sequence  RTWELGTRYDDGALTAEMGLFLINFNNQYDSNQTNDTVTARGKTRHTGLETQARYDLGTLTPTLDNVSIYASYAYVNAEI
Template Known Secondary structure 
SSS





TTTT






TTSS
GGGTT
Template Predicted Secondary structure 


























Template SS confidence 















































































   538.540.........550.........560.........570.........580.........590.........600.........610.......
 
   261........270.........280.........290.........300.........310. ........320......
Predicted Secondary structure 

























...........


...
Query SS confidence 


















































. . . . . . . . . . .














. . .
Query Sequence  PITNKFTNTSGFANKTQDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGIGDV. . . . . . . . . . . DLVNYFEVGATYYFN. . .
Query Conservation                          
           
              ...........       

  
   ...
Alig confidence 


























.






















...........














...
Template Conservation         
  
   
         
  .          
                         
   

   
      
Template Sequence  REKGDTYGNLVPFSPKHKGTLGVDYKP. GNWTFNLNSDFQSSQFADNANTVKESADGSTGRIPGFMLWGARVAYDFGPQM
Template Known Secondary structure 
SSSTTTT
B
SS

SB
S.TT

B
SSTT


S

SSSSSS
B

S
TTT
Template Predicted Secondary structure 















.




















Template SS confidence 















































































   618.620.........630.........640.... .....650.........660.........670.........680.........690......
 
   327..330.... .....340.........350.........360..
Predicted Secondary structure 

.........













Query SS confidence 







. . . . . . . . .



























Query Sequence  KNMSTYVD. . . . . . . . . YIINQIDSDNKLGVGSDDTVAVGIVYQF
Query Conservation 
       .........
     
              

 
  
Alig confidence 







.........



























Template Conservation      
 
 
 

 
  
                

   
   
 
Template Sequence  ADLNLAFGVKNIFDQDYFIRSYDDNNKGIYAGQPRTLYMQGSLKF
Template Known Secondary structure  T

STT




SSTT





Template Predicted Secondary structure 
















Template SS confidence 












































   697..700.........710.........720.........730.........740.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions