Job Description P39283 Confidence 2.22% Date Thu Jan 5 11:58:53 GMT 2012 Rank 62 Aligned Residues 64 % Identity 16% Template c3mv2A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:coatomer subunit alpha; PDBTitle: crystal structure of a-cop in complex with e-cop Resolution 2.90 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.																														.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	R	A	L	Q	F	S	A	G	D	V	A	E	I	E	Q	T	I	L	S	F	V	D	A	C	H	T	R	K	V	A	M	V	V	G	S	T	I	N	T	L	K	D	R	D	G	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	G	N
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	Y	R	I	T	L	L	M	V	D	D	A	E	D	E	K	L	A	H	K	I	L	E	T	A	R	E	Y	I	L	G	L	S	I	E	L	E	R	R	S	L	K	E	G	N	T	V	R	M	L	E	L	A	A	Y	F	T	K	A	K	L	S	P	I	H	R	T	N	A	L	Q	V	A	M	S	Q	H	F	K	H
Template Known Secondary structure							T			B		S	S																												T			T	T												G	G	G	S																					T
Template Predicted Secondary structure
Template SS confidence
		1017	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	D	I	Y	C	A	Y	L	I	R	C	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	N	F	L	Q	A	S	Y	F	A	G	E	F
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		1097	.	.	1100	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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