Job Description P39283 Confidence 3.55% Date Thu Jan 5 11:58:53 GMT 2012 Rank 35 Aligned Residues 82 % Identity 18% Template c3f4mA_ PDB info PDB header:immune system Chain: A: PDB Molecule:tumor necrosis factor, alpha-induced protein 8- PDBTitle: crystal structure of tipe2 Resolution 1.70 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30											.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50												.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	R	A	L	Q	F	S	A	G	D	V	A	E	I	E	Q	.	.	.	.	.	.	.	.	.	.	T	I	L	S	F	V	D	A	C	H	T	R	K	V	A	M	V	V	G	S	.	.	.	.	.	.	.	.	.	.	.	T	I	N	T	L	K	D	R	D	G	K	R	W	G	N	L	P	D	I	Y	C	A	Y
Query Conservation																		.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	R	N	G	S	F	G	P	S	E	L	A	L	A	T	R	F	R	Q	K	L	R	Q	G	A	M	T	A	L	S	F	G	E	V	D	F	T	F	E	A	A	V	L	A	G	L	L	T	E	C	R	D	V	L	L	E	L	V	E	H	H	L	T	P	K	S	H	G	R	I	R	H	V	F	D	H	F	S	D	P
Template Known Secondary structure				T	T																												T	S	T	T	S																							T	T	T	S																T
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	R	C	L	V	F	R	G	E	L	V	G	Y	G	D	L	F	R	M	R	Y	S	E	I	K
Query Conservation
Alig confidence												.	.	.
Template Conservation												.	.	.
Template Sequence		G	L	L	T	A	L	Y	G	P	D	.	.	.	F	T	Q	H	L	G	K	I	C	D	G	L	R
Template Known Secondary structure								T	S	G	G	.	.	.	G
Template Predicted Secondary structure												.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.				.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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