Job Description P0A9N0 Confidence 7.66% Date Thu Jan 5 11:10:46 GMT 2012 Rank 43 Aligned Residues 69 % Identity 10% Template c1ztgD_ PDB info PDB header:dna, rna binding protein/dna Chain: D: PDB Molecule:poly(rc)-binding protein 1; PDBTitle: human alpha polyc binding protein kh1 Resolution 3.00 Å

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		2	.	.	.	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		T	V	K	Q	T	V	E	I	T	N	K	.	.	L	G	M	H	A	R	P	A	M	K	L	F	E	L	M	Q	G	F	D	A	E	V	L	L	R	N	D	E	G	T	E	A	E	A	N	S	V	I	A	L	L	M	L	D	S	A	K	G	R	Q	I	E	V	E	A	T	G	P	Q	E	E	E	A	L	A	A	V
Query Conservation													.	.
Alig confidence													.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	T	I	R	L	L	M	H	G	K	E	V	G	S	I	I	G	K	K	G	E	S	V	K	R	I	R	E	E	S	G	A	R	I	N	I	S	E	G	N	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	R	I	I	T	L	T	G	P	T	N	A	I	F	K	A	F	A	M	I
Template Known Secondary structure																		T		T	T	T																			S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.																		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	L	F	N	S	G	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	D	K	L	E	E	D	I
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions