Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9W0
Confidence97.52%DateThu Jan 5 11:11:32 GMT 2012
Rank64Aligned Residues71
% Identity10%Templated1v4ra1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain GntR-like transcriptional regulators
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10...... ...20 .........30.........40.........50.........60.........70.......
Predicted Secondary structure  .........


.

















Query SS confidence 








. . . . . . . . .



.
























































Query Sequence  QILLEMLAQ. . . . . . . . . LGFV. TVEKVVERLGISPATARRDINKLDESGKLKKVRNGAEAITQQRPRWTPMNLHQAQNH
Query Conservation    

  
  ......... 
 
. 
 



   

  





  

  
 
 
  


               
     
Alig confidence 








.........



.
























































Template Conservation   

   
   
  
    
  




 

    

  


 

  
  



      
  
                  
Template Sequence  ADVATHFRTLIKSGELAPGDTLPSVADIRAQFGVAAKTVSRALAVLKSEGLVSSRGALGTVVEKNPIVITGADRLKRMEK
Template Known Secondary structure  TTTTS

TTSB


SSS
TTTTTTTTSS

TTTS
S




SS
TTS
Template Predicted Secondary structure 


























Template SS confidence 















































































   12.......20.........30.........40.........50.........60.........70.........80.........90.
 
   78
Predicted Secondary structure 
Query SS confidence 
Query Sequence  D
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  N
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   92
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions