Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9W0
Confidence95.35%DateThu Jan 5 11:11:32 GMT 2012
Rank203Aligned Residues39
% Identity15%Templated1i5za1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain CAP C-terminal domain-like
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30.........40.........50........
Predicted Secondary structure 







Query SS confidence 






































Query Sequence  VTVEKVVERLGISPATARRDINKLDESGKLKKVRNGAEA
Query Conservation 
 
 



   

  





  

  
 
 
  


  
Alig confidence 






































Template Conservation 

  


   
 

 



 
  
   
 
      
 
Template Sequence  ITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVV
Template Known Secondary structure 

T

TTSTT
Template Predicted Secondary structure 









Template SS confidence 






































   167..170.........180.........190.........200.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions