Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9W0
Confidence83.93%DateThu Jan 5 11:11:32 GMT 2012
Rank372Aligned Residues104
% Identity12%Templatec3t1bB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:transcriptional regulator, lysr family; PDBTitle: crystal structure of the full-length aphb n100e variant
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40..... ....50.........60.........70.........80..
Predicted Secondary structure 





...














Query SS confidence 







































. . .




































Query Sequence  RHQILLEMLAQLGFVTVEKVVERLGISPATARRDINKLDE. . . SGKLKKVRNGAEAITQQRPRWTPMNLHQAQNHDEKVR
Query Conservation 
   

  
   
 
 
 



   

  





  

 ... 
 
 
  


               
       
  
Alig confidence 












..
























...












.






















Template Conservation    
  
  
   
..
 
 

  
 


 


  
  

  

  

 
   
  
.
  
  
   
            
Template Sequence  DDLNLFRLVVENG. . SYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTL. TEAGERFYKDCSPLLERLASMTE
Template Known Secondary structure  S..S


T




SSS
.
Template Predicted Secondary structure 
..









.

Template SS confidence 















































































   4.....10...... ...20.........30.........40.........50....... ..60.........70.........80
 
   83......90.........100.........110..
Predicted Secondary structure 







Query SS confidence 





























Query Sequence  IAKAASQLVNPGESVVINCGSTAFLLGREM
Query Conservation 

  
   
     



 


   

  
Alig confidence 





























Template Conservation                                
Template Sequence  EITDECRGASGRIRISAPSELTKRMMMPMF
Template Known Secondary structure  S

S

TTTTTTT
Template Predicted Secondary structure 














Template SS confidence 





























   81........90.........100.........110
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions