Job Description P0A9W0 Confidence 97.86% Date Thu Jan 5 11:11:32 GMT 2012 Rank 38 Aligned Residues 151 % Identity 12% Template c3ecsD_ PDB info PDB header:translation Chain: D: PDB Molecule:translation initiation factor eif-2b subunit PDBTitle: crystal structure of human eif2b alpha Resolution 2.65 Å

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		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.								.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.																.	.									.	.	.	.	.	.	.
Query SS confidence																															.																.	.									.	.	.	.	.	.	.
Query Sequence		N	L	H	Q	A	Q	N	H	D	E	K	V	R	I	A	K	A	A	S	Q	L	V	N	P	G	E	S	V	V	.	I	N	C	G	S	T	A	F	L	L	G	R	E	M	C	.	.	G	K	P	V	Q	I	I	T	.	.	.	.	.	.	.	N	Y	L	P	L	A	N	Y	L	I	D	Q	E	H	D	S	V	I
Query Conservation																															.																.	.									.	.	.	.	.	.	.
Alig confidence																															.																.	.									.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	F	L	R	R	I	S	L	S	R	N	K	I	A	D	L	C	H	T	F	I	K	D	G	A	T	I	L	T	H	A	Y	S	R	V	V	L	R	V	L	E	A	A	V	A	A	K	K	R	F	S	V	Y	V	T	E	S	Q	P	D	L	S	G	K	K	X	A	K	A	L	C	H	L	N	V	P	V	T	V
Template Known Secondary structure																					T	T			T	T							S															T	T											T	T	T	T											T	T	T
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		I	M	G	G	Q	Y	N	K	S	Q	S	I	T	L	S	P	Q	G	S	E	N	S	L	Y	A	G	H	W	M	F	T	S	G	K	G	L	T	A	E	G	L	Y	K	T	D	M	L	T	A	M	A	E	Q	K	M	L	S	V	V	G	K	L	V	V	L	V	D	S	S	K	I	G	E	R	A	G	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	D	A	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	I	X	E	K	A	D	L	V	I	V	G	A	E	G	V	V	E	N	G	G	I	I	N	K	I	G	T	N	Q	X	A	V	C	A	K	A	Q	N	K	P	F	Y	V	V	A	E	S	F	K	F	V	R	L	F	P	L	N	Q	Q
Template Known Secondary structure				G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.				G	G	G		S							S				T	T	S						T	T											T	T									G	G	G	B		S				S	S	G	G
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.														.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
																							216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	L	F	S	R	A	D	Q	I	D	M	L	I	T	G	K	N	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	P	D	K	F	K	Y	K	A	D	G	Q	D	L	K	E	E	H	P	W	V	D	Y	T	A	P	S	L	I	T	L	L	F	T	D	L	G	V
Template Known Secondary structure		G	S						S	S					S							S						G	G	G		S					T	T
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions