Job Description P0A9W0 Confidence 97.43% Date Thu Jan 5 11:11:32 GMT 2012 Rank 72 Aligned Residues 149 % Identity 17% Template c3cdkD_ PDB info PDB header:transferase Chain: D: PDB Molecule:succinyl-coa:3-ketoacid-coenzyme a transferase PDBTitle: crystal structure of the co-expressed succinyl-coa2 transferase a and b complex from bacillus subtilis Resolution 2.59 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.													.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																								.													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	E	K	V	R	I	A	K	A	A	S	Q	L	V	N	P	G	E	S	V	V	I	N	C	G	S	T	A	F	L	L	G	R	E	M	C	G	K	.	P	V	Q	I	I	T	N	Y	L	P	L	A	.	.	.	.	.	.	.	.	.	.	.	.	N	Y	L	I	D	Q	E	H	D	S	V	I	I	M	G	G	Q
Query Conservation																																								.													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.													.													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.
Template Sequence		E	A	R	K	R	M	V	K	R	A	V	Q	E	I	K	D	G	M	N	V	N	L	G	I	G	.	M	P	T	L	V	A	N	E	I	P	D	G	V	H	V	M	L	Q	S	E	N	G	L	L	G	I	G	P	Y	P	L	E	G	T	E	D	A	D	L	I	N	A	G	K	E	T	I	T	E	V	T	G	A	S
Template Known Secondary structure													T	T			T	T							T	T	.	G	G	G	G	G	G	G	G			T	T								T	T	T										T	T				T	T		B		T	T	S		B
Template Predicted Secondary structure																											.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190						.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.			210	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.																				.	.
Query SS confidence																																																.	.	.	.	.																				.	.
Query Sequence		Y	N	K	S	Q	S	I	T	L	S	P	Q	G	S	E	N	S	L	Y	A	G	H	W	M	F	T	S	G	K	G	L	T	A	E	G	L	Y	K	T	D	M	L	T	A	M	A	.	.	.	.	.	E	Q	K	M	L	S	V	V	G	K	L	V	V	L	V	D	S	S	K	.	.	I	G	E	R	A	G	M	L
Query Conservation																																																.	.	.	.	.																				.	.
Alig confidence										.	.	.	.	.																																		.	.	.	.	.																				.	.
Template Conservation										.	.	.	.	.
Template Sequence		Y	F	D	S	A	E	S	F	.	.	.	.	.	A	M	I	R	G	G	H	I	D	L	A	I	L	G	G	M	E	V	S	E	Q	G	D	L	A	N	W	M	I	P	G	M	V	K	G	M	G	G	A	M	D	L	V	N	G	A	K	R	I	V	V	I	M	E	H	V	N	S	K	V	K	K	T	C	S	L	P
Template Known Secondary structure										.	.	.	.	.					T	T										S				T	T						S										T	T									S	S							S					B		S	S			S
Template Predicted Secondary structure										.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.						90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	R	A	D	Q	I	D	M	L	I	T	G	K	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	G	Q	K	V	V	H	R	L	I	T	D	L	A
Template Known Secondary structure			S	B	S	S			S					S	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions