Job Description P0A9W0 Confidence 97.72% Date Thu Jan 5 11:11:32 GMT 2012 Rank 50 Aligned Residues 151 % Identity 11% Template c3a11D_ PDB info PDB header:isomerase Chain: D: PDB Molecule:translation initiation factor eif-2b, delta PDBTitle: crystal structure of ribose-1,5-bisphosphate isomerase from2 thermococcus kodakaraensis kod1 Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.				.	.	.	120	.	.	.	.	.							.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.																			.	.	.										.	.	.	.	.	.
Query SS confidence																															.																			.	.	.										.	.	.	.	.	.
Query Sequence		N	L	H	Q	A	Q	N	H	D	E	K	V	R	I	A	K	A	A	S	Q	L	V	N	P	G	E	S	V	V	.	I	N	C	G	S	T	A	F	L	L	G	R	E	M	C	G	K	P	.	.	.	V	Q	I	I	T	N	Y	L	P	.	.	.	.	.	.	L	A	N	Y	L	I	D	Q	E	H	D	S	V	I
Query Conservation																															.																			.	.	.										.	.	.	.	.	.
Alig confidence																															.																			.	.	.										.	.	.	.	.	.
Template Conservation
Template Sequence		K	E	F	I	H	N	S	E	K	A	L	E	R	I	G	E	F	G	A	K	R	I	E	D	G	D	V	I	M	T	H	C	H	S	K	A	A	I	S	V	M	K	T	A	W	E	Q	G	K	D	I	K	V	I	V	T	E	T	R	P	K	W	Q	G	K	I	T	A	K	E	L	A	S	Y	G	I	P	V	I	Y
Template Known Secondary structure										T											T	T			T	T							S															T	T											T	T	T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		I	M	G	G	Q	Y	N	K	S	Q	S	I	T	L	S	P	Q	G	S	E	N	S	L	Y	A	G	H	W	M	F	T	S	G	K	G	L	T	A	E	G	L	Y	K	T	D	M	L	T	A	M	A	E	Q	K	M	L	S	V	V	G	K	L	V	V	L	V	D	S	S	K	I	G	E	R	A	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.						.	.																																																			.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.						.	.
Template Sequence		V	V	D	S	A	A	R	.	.	.	.	.	.	.	.	.	.	.	H	Y	M	K	M	.	.	T	D	K	V	V	M	G	A	D	S	I	T	V	N	G	A	V	I	N	K	I	G	T	A	L	I	A	L	T	A	K	E	H	R	V	W	T	M	I	A	A	E	T	Y	K	F	H	P	E	T	M	L	G	Q	L
Template Known Secondary structure				G	G	G	T	T	.	.	.	.	.	.	.	.	.	.	.	T	T	G	G	G	.	.		S							S				T	T							T	T											T	T									G	G	G	B		S	S			T	T	T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.						.	.
Template SS confidence
		182	.	.	.	.	.	.												.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
																													215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	L	F	S	R	A	D	Q	I	D	M	L	I	T	G	K	N	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	E	M	R	D	P	T	E	V	I	P	E	D	E	L	K	T	W	P	K	N	I	E	V	W	N	P	A	F	D	V	T	P	P	E	Y	V	D	V	I	I	T	E	R	G	I
Template Known Secondary structure				B			G	G	G	T	S						T	T	S		S	S						B	S						G	G	G		S					T	T
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions