Job Description P0A9W0 Confidence 97.62% Date Thu Jan 5 11:11:32 GMT 2012 Rank 56 Aligned Residues 151 % Identity 18% Template c2yvkA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:methylthioribose-1-phosphate isomerase; PDBTitle: crystal structure of 5-methylthioribose 1-phosphate2 isomerase product complex from bacillus subtilis Resolution 2.40 Å

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		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.										100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.								.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.															.	.												.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.															.	.												.	.	.	.	.	.	.
Query Sequence		Q	A	Q	N	H	D	E	K	V	R	I	A	K	A	A	S	Q	L	V	N	P	G	E	S	V	V	I	.	.	.	.	.	.	.	.	.	N	C	G	S	T	A	F	L	L	G	R	E	M	C	.	.	G	K	P	V	Q	I	I	T	N	Y	L	.	.	.	.	.	.	.	P	L	A	N	Y	L	I	D	Q	E
Query Conservation																													.	.	.	.	.	.	.	.	.															.	.												.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.															.	.												.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	V	E	D	E	E	T	C	R	L	I	G	Q	N	A	L	Q	L	F	K	K	G	D	R	I	M	T	I	C	N	A	G	S	I	A	T	S	R	Y	G	T	A	L	A	P	F	Y	L	A	K	Q	K	D	L	G	L	H	I	Y	A	C	E	T	R	P	V	L	Q	G	S	R	L	T	A	W	E	L	M	Q	G
Template Known Secondary structure																	G	G	G			T	T							S			S	T	T	T	S	S	S	S		S	T	T									T	T											T	T	T	T					T							T	T
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	D	S	V	I	I	M	G	G	Q	Y	N	K	S	Q	S	I	T	L	S	P	Q	G	S	E	N	S	L	Y	A	G	H	W	M	F	T	S	G	K	G	L	T	A	E	G	L	Y	K	T	D	M	L	T	A	M	A	E	Q	K	M	L	S	V	V	G	K	L	V	V	L	V	D	S	S	K	I	G	E	R	A
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.
Template Sequence		G	I	D	V	T	L	I	T	D	.	.	.	.	.	.	.	.	.	.	S	M	A	A	H	T	M	K	E	K	Q	I	S	A	V	I	V	G	A	D	R	I	A	K	N	G	D	T	A	N	K	I	G	T	Y	G	L	A	I	L	A	N	A	F	D	I	P	F	F	V	A	A	P	L	S	T	F	D	T	K	V
Template Known Secondary structure		T								G	.	.	.	.	.	.	.	.	.	.	G	G								T	T									S				T	T							T	T											T	T									G	G	G			T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220											.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
																																				215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	L	F	S	R	A	D	Q	I	D	M	L	I	T	G	K	N	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	C	G	A	D	I	P	I	E	E	R	D	P	E	E	V	R	Q	I	S	G	V	R	T	A	P	S	N	V	P	V	F	N	P	A	F	D	I	T	P	H	D	L	I	S	G	I	I	T	E	K	G	I
Template Known Secondary structure		S	S	G	G	G	S				B			T							T	T				S		T	T						B	S						G	G	G		S					T	T
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions