 |
Job Description | P0A9W0 | Confidence | 80.97% | Date | Thu Jan 5 11:11:32 GMT 2012 |
Rank | 413 | Aligned Residues | 36 |
% Identity | 14% | Template | c2rnjA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:response regulator protein vrar; |
PDBTitle: nmr structure of the s. aureus vrar dna binding domain
|
Resolution | UNK |
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | H | Q | I | L | L | E | M | L | A | Q | L | G | F | V | T | V | E | K | V | V | E | R | L | G | I | S | P | A | T | A | R | R | D | I | N | K | L |
Query Conservation |   |
|   |   |   |
|
|   |   |
|   |   |   |
|   |
|   |
|   |
|
|
|
|   |   |   |
|
|   |   |
|
|
|
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|   |   |
|   |   | . | . |
|   |   |   |   |
|
|
|   |   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |
|
Template Sequence |   |
R | E | M | E | I | L | L | L | I | A | K | . |
. |
G | Y | S | N | Q | E | I | A | S | A | S | H | I | T | I | K | T | V | K | T | H | V | S | N | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | . | . | T |
|
| T | T |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
151 | . | . | . | . | . | . | . | . | 160 | . | |
|
. | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|