 |
Job Description | Q9JMT8 | Confidence | 25.00% | Date | Thu Jan 5 12:38:13 GMT 2012 |
Rank | 338 | Aligned Residues | 92 |
% Identity | 12% | Template | d1o4ua1 |
SCOP info | TIM beta/alpha-barrel
| Nicotinate/Quinolinate PRTase C-terminal domain-like
| NadC C-terminal domain-like
|
Resolution | 2.50 |
|
 |
  |   |
227 | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | E | L | Y | I | I | R | R | Y | Q | S | S | L | R | R | I | R | N | N | N | V | Y | L | S | L | N | D | F | G | M | G | Y | A | E | L | S | H | L | Q | N | I | P | F | S | Y | V | N | L | H | K | T | M | F | H | D | I | E | S | N | S | L | T | D | I | I | A | T | T | I | I | D | L | S | K | Q | L | H | I | D | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |
|
|
|
|
|   |
|   |   |
|
|   |   |
|   |   |
|   |   |
|   |
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
| . | . |
|   |
|   |
|
|
|   |   |
|   |   |   |
|
|
|   |
|   |
|
|   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |
|   |
|
Template Sequence |   |
K | M | Y | G | S | A | E | R | A | V | Q | E | V | R | K | I | I | P | F | T | T | K | I | E | V | E | . |
. |
V | E | N | L | E | D | A | L | R | A | V | E | A | G | A | D | I | V | M | L | D | N | L | S | P | E | E | V | . |
. |
. |
K | D | I | S | R | R | I | K | D | I | . |
. |
. |
. |
. |
N | P | N | V | I | V |
Template Known Secondary structure |   |
 |  |  | S | S |  |  |  |  |  |  |  |  |  | T | T | S |
| T | T | S |
|  |  |  |  | . | . |  | S | S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  | S |
|
|  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |
| T | T | S |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  | . | . |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | |
|
. | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | |
|
|
. | . | . | . | 220 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 230 | . |
  |
  |   |
307 | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | A | D | G | I | E | T | K | K | Q | A | G | Y | M | I | E | R | G | V | K | Y | L |
Query Conservation |   |
|
|   |
|
|
|   |   |
|
|   |   |   |
|   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|   |   |   |
|
|   |   |   |   |   |   |
|
|
|   |
|
Template Sequence |   |
E | V | S | G | G | I | T | E | E | N | V | S | L | Y | D | F | E | T | V | D | V | I |
Template Known Secondary structure |   |
 |  |  |  |
|
|
| T | T | T | G | G | G | G |
|
| T | T |
|
|  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
232 | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|