Job Description Q9JMT8 Confidence 100.00% Date Thu Jan 5 12:38:13 GMT 2012 Rank 5 Aligned Residues 244 % Identity 17% Template c3s83A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ggdef family protein; PDBTitle: crystal structure of eal domain from caulobacter crescentus cb15 Resolution 1.34 Å

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		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		L	P	V	V	S	S	K	G	E	S	M	A	H	Y	N	I	Y	Y	Q	P	I	Y	N	A	K	N	G	N	I	A	G	C	D	V	T	I	A	L	K	N	S	D	G	S	A	F	A	L	D	S	D	R	I	N	Y	N	P	N	D	N	K	V	S	Y	L	F	G	H	I	N	K	L	F	S	P	I	K	N	N	.
Query Conservation																																																																																	.
Alig confidence																																														.																																			.
Template Conservation																																														.
Template Sequence		L	E	A	D	L	R	G	A	I	G	R	G	E	I	T	P	Y	F	Q	P	I	V	R	L	S	T	G	A	L	S	G	F	E	A	L	A	R	W	I	H	P	R	R	G	.	X	L	P	P	D	E	F	L	P	L	I	E	E	X	G	L	X	S	E	L	G	A	H	X	X	H	A	A	A	Q	Q	L	S	T	W
Template Known Secondary structure													T	S											T	T	T															T	T	T		.				G	G	G	T							T	T
Template Predicted Secondary structure																																														.
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.		.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
							181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	L	P	H	G	F	F	I	T	I	N	I	N	P	E	D	I	L	T	C	D	I	E	R	E	C	L	H	F	I	K	V	F	G	T	E	R	I	R	L	V	L	Q	F	S	T	K	E	E	L	Y	I	I	R	R	Y	Q	S	S	L	R	R	I	R	N	N	N	V	Y	L	S	L	N	D	F	G
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		R	A	A	H	P	A	X	G	N	L	T	V	S	V	N	L	S	T	G	E	I	D	R	P	G	L	V	A	D	V	A	E	T	L	R	V	N	R	L	P	R	G	A	L	K	L	E	V	T	E	S	D	I	X	R	D	P	E	R	A	A	V	I	L	K	T	L	R	D	A	G	A	G	L	A	L	D	D	F	F
Template Known Secondary structure						T	T												T	T	G	G	G	S	T	T												T	T			T	T	S																												T
Template Predicted Secondary structure
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	Y	A	E	L	S	H	L	Q	N	I	P	F	S	Y	V	N	L	H	K	T	M	F	H	D	I	E	S	N	S	L	T	D	I	I	A	T	T	I	I	D	L	S	K	Q	L	H	I	D	V	I	A	D	G	I	E	T	K	K	Q	A	G	Y	M	I	E	R	G	V	K	Y	L	K	G	I	A	L	S	S
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	S	S	L	S	Y	L	T	R	L	P	F	D	T	L	K	I	D	R	Y	F	V	R	T	X	G	N	N	A	G	S	A	K	I	V	R	S	V	V	K	L	G	Q	D	L	D	L	E	V	V	A	E	G	V	E	N	A	E	X	A	H	A	L	Q	S	L	G	C	D	Y	G	Q	G	F	G	Y	A	P
Template Known Secondary structure		.	.	.									S															T	T	T																		T	T										S											T						B	T	T	T	B
Template Predicted Secondary structure		.	.	.
Template SS confidence
					453	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	P	A	D	A	F	V	R	K	L	L	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	S	P	Q	E	A	E	V	Y	L	N	E	A
Template Known Secondary structure			B												S
Template Predicted Secondary structure
Template SS confidence
		530	.	.	.	.	.	.	.	.	.	540	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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