Job Description Q9JMT8 Confidence 97.25% Date Thu Jan 5 12:38:13 GMT 2012 Rank 23 Aligned Residues 84 % Identity 19% Template c3qyyB_ PDB info PDB header:signaling protein/inhibitor Chain: B: PDB Molecule:response regulator; PDBTitle: a novel interaction mode between a microbial ggdef domain and the bis-2 (3, 5 )-cyclic di-gmp Resolution 1.90 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.				20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		K	I	K	L	N	L	I	D	Y	D	S	I	V	N	I	.	.	.	E	F	P	C	L	L	S	E	I	E	I	E	L	L	S	Q	L	L	K	G	Y	S	V	N	E	I	S	K	R	R	N	R	S	I	K	T	V	S	C	Q	K	M	K	L	Y	K	K	L	N	V	K	S	D	L	T	L	W	R	D	V	F	L
Query Conservation																	.	.	.
Alig confidence																	.	.	.																												.
Template Conservation																																															.
Template Sequence		S	A	Y	G	W	L	G	A	Q	D	W	I	G	R	W	G	G	D	E	F	L	I	G	V	H	A	S	E	D	E	A	T	L	K	L	N	Q	W	L	S	M	L	E	E	A	.	P	L	H	V	S	A	G	S	A	V	C	E	V	G	I	D	A	T	E	L	Y	R	R	A	D	A	A	M	Y	R	A	K	F	S
Template Known Secondary structure					T	T			T	T								T	T								S																				.													T	T																				T
Template Predicted Secondary structure																																															.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	K	A	Y	L	Q	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	R	R	L	V	R	D
Template Known Secondary structure		T	S	S
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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