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Job DescriptionQ9JMT8
Confidence93.12%DateThu Jan 5 12:38:13 GMT 2012
Rank43Aligned Residues108
% Identity12%Templatec3nhzA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:two component system transcriptional regulator mtra; PDBTitle: structure of n-terminal domain of mtra
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  YIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIAD
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Template Sequence  DDASLAEMLTIVLRGEGF. . DTAVIGDGTQALTAVRELRPDLVLLDLML. . . . . PGMNGIDVCRVLRA. . DSGVPIVMLT
Template Known Secondary structure  S
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Query Sequence  GIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL
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Template Sequence  AKTDTVDVVLGLESGADD. . . . YIMKPFKPKELVARVRARL
Template Known Secondary structure  TT
SS
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   84.....90.........100. ........110.........120
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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